EY753426

Overview
NameEY753426
Unique NameEY753426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.549e-21
Identity = 89/334 (26.65%), Postives = 140/334 (41.92%), Query Frame = 1
Query:    1 LGEVLGGNELIDSQIDIKFQRNVDKASICS-----LDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKH----------------------------VLY------------THKIINFKYNKDQIIHVNLTQD-----------GPKPLEVGRT----LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMY 819
            LGEVL G+ ++++   +          +CS     + L   + +   + I  +Y+     D+LP+   + +L+ +++SD+ K                             +LY            T++++ F+     I   +L  D              P E+  T    L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTLR D A Y               EESGWKLVHGDVFRPP+  ++LS                        L    RGA+ TT    +       G+ +G +Y
Sbjct:   76 LGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSRLVAERITEDYYVHLIADNLPVATRL-ELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLY 401          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20
Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  340 LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMY 819
            L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTLR D A Y               EESGWKLVHGDVFRPP+  ++LS                        L    RGA+ TT    +       G+ +G +Y
Sbjct:  249 LYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLY 402          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20
Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  340 LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMY 819
            L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTLR D A Y               EESGWKLVHGDVFRPP+  ++LS                        L    RGA+ TT    +       G+ +G +Y
Sbjct:  249 LYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLY 402          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20
Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  340 LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMY 819
            L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTLR D A Y               EESGWKLVHGDVFRPP+  ++LS                        L    RGA+ TT    +       G+ +G +Y
Sbjct:  248 LYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLY 401          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20
Identity = 85/330 (25.76%), Postives = 133/330 (40.30%), Query Frame = 1
Query:    1 LGEVLGGNELIDSQIDIKFQRNVDKASI-----CSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSD-------NGKHVLYTHKIINFKYNKDQIIHVNLTQD--------------------------GPKPLEVGRTLDM-----------------TYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLYIGR-GAIXTTFIVCYALTIFISGYVSGGMYS 822
            LGE+L G+ + +S     F  +  K  +     CS  + +  +K  +D I+N Y   + LD LP+    G L  D   D        G+ V    K +N         H N T +                          G    + G   +                  TY VK+TP+ V + +R+D+Y +    ++ +HWFSI NS M+V  LT +V+MI++RTL+ D  +Y               EE+GWK++HGDVFRPP + ++LS                        L     G + T  IV + L+   +GY S  +++
Sbjct:   79 LGEILLGDRIENSDYTFNFLTDGGKCKVINSESCSPIIKKEDLKVLEDRIQNQYRVHWLLDGLPVRQ-TGRLASDPGFDLGFMTLAEGQTVATAEKYLNNHLEITIFYHSNPTDNTSRIVGFEIFPTSRQYKKVENWKGDTGDDCPQYGENFEQLSVSVKEGEDQERFVLWTYEVKYTPSPVLWNKRWDIYFESN--DNSVHWFSILNSLMIVFILTVMVAMIIIRTLKKDIRRYTSIDTSEDRDS---QEETGWKMIHGDVFRPPSHPMLLSVCIGSGVQIFSMTLITMIFAVLGFLSPANIGGLATALIVLFVLSAMFAGYFSTRVFT 402          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17
Identity = 58/165 (35.15%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  349 TYSVKWTPT-NVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMYSRMGAK 837
            TYS+ +    N+ +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKLVHGD+FRPPR  ++LS                        L    RGA+ T  +V + L    +GYV+   Y   G +
Sbjct:  270 TYSISFEEEKNIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGE 428          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17
Identity = 58/165 (35.15%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  349 TYSVKWTPT-NVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMYSRMGAK 837
            TYS+ +    N+ +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKLVHGD+FRPPR  ++LS                        L    RGA+ T  +V + L    +GYV+   Y   G +
Sbjct:  269 TYSISFEEEKNIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGE 427          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.157e-17
Identity = 58/165 (35.15%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  349 TYSVKWTPTN-VTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMYSRMGAK 837
            TYSV +   + + +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKLVHGD+FRPPR  ++LS                        L    RGA+ T  +V + L    +GYV+   Y   G +
Sbjct:  270 TYSVSFEEDDKIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGE 428          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17
Identity = 58/165 (35.15%), Postives = 81/165 (49.09%), Query Frame = 1
Query:  349 TYSVKWTPTN-VTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMYSRMGAK 837
            TYSV +     + +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKLVHGD+FRPPR  ++LS                        L    RGA+ T  +V + L    +GYV+   Y   G +
Sbjct:  270 TYSVSFEEDKKIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGE 428          
BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TMN2_YEAST (Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae GN=TMN2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16
Identity = 57/173 (32.95%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  316 KPLEVGRTLD----MTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMY 819
            KPL +    D     TYSVK+  ++  +A R+D YL    ++ QI WFS+ N  ++VI L+ +V   L+R L++D A+Y               E+SGWKL HGDVFR P   ++LS                        +  + RG++ T   V YAL  F+  Y S G+Y
Sbjct:  266 KPLILDEDKDNEVYFTYSVKFVASDTVWATRWDKYLH--IYDPQIQWFSLINFSVIVILLSSVVMHSLLRALKSDLARY-----NELNLDNEFHEDSGWKLGHGDVFRTPSKSMLLSILVGSGMQLFLMVMCSIFFAAVGLVSPVSRGSLPTVMFVLYALFGFVGSYASMGVY 431          
The following BLAST results are available for this feature:
BLAST of EY753426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TM9S4_HUMAN1.549e-2126.65Transmembrane 9 superfamily member 4 OS=Homo sapie... [more]
TM9S4_RAT1.311e-2037.89Transmembrane 9 superfamily member 4 OS=Rattus nor... [more]
TM9S4_MOUSE1.311e-2037.89Transmembrane 9 superfamily member 4 OS=Mus muscul... [more]
TM9S4_BOVIN1.311e-2037.89Transmembrane 9 superfamily member 4 OS=Bos taurus... [more]
PHG1A_DICDI1.713e-2025.76Putative phagocytic receptor 1a OS=Dictyostelium d... [more]
TM9S2_RAT1.772e-1735.15Transmembrane 9 superfamily member 2 OS=Rattus nor... [more]
TM9S2_MOUSE1.772e-1735.15Transmembrane 9 superfamily member 2 OS=Mus muscul... [more]
TM9S2_HUMAN5.157e-1735.15Transmembrane 9 superfamily member 2 OS=Homo sapie... [more]
TM9S2_PONAB6.735e-1735.15Transmembrane 9 superfamily member 2 OS=Pongo abel... [more]
TMN2_YEAST4.365e-1632.95Transmembrane 9 superfamily member 2 OS=Saccharomy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753426 ID=EY753426; Name=EY753426; organism=Citrus sinensis; type=EST; length=880bp
CTTGGTGAGGTCCTGGGTGGAAATGAACTTATTGACAGTCAAATAGACAT
AAAGTTCCAAAGGAATGTTGACAAAGCCTCCATCTGTTCATTGGATCTTG
ATGAGGCAAAGGTCAAACAATTCAAAGATGCAATTGAGAACAATTATTGG
TTTGAATTCTTCTTGGATGATCTGCCTTTATGGGGCTTTGTTGGTGATCT
GCATCCTGATAAGAACAGTGATAATGGGAAGCACGTCCTCTACACACACA
AGATTATAAATTTTAAATACAATAAAGATCAGATTATTCATGTTAATCTC
ACTCAAGACGGCCCAAAGCCTCTGGAAGTTGGGAGGACACTGGACATGAC
ATACTCAGTCAAATGGACTCCAACTAATGTCACTTTTGCGCGTCGTTTTG
ATGTATATTTGGACTACCCTTTCTTTGAGCACCAGATCCATTGGTTCTCC
ATTTTCAATTCTTTCATGATGGTTATCTTCCTCACTGGTTTGGTATCAAT
GATATTGATGCGGACTCTTAGAAATGATTATGCCAAGTATGCACGGGAAG
ATGATGATCTAGAGACTTTGGAAAGAGATGTGAGTGAGGAATCTGGTTGG
AAACTTGTTCATGGGGATGTTTTCCGGCCTCCTCGTAATTTGGTTGTCCT
TTCAGCTGTTGTAGGCACTGGTGCACAGCTTGCATTGCTCGTTCTACTCG
TTATTCTGATGGCAATTGTGGGAACTTTGTATATTGGGAGAGGAGCCATT
GNGACTACTTTCATAGTATGTTATGCTCTTACCATCTTCATTTCTGGTTA
TGTGAGTGGTGGGATGTACTCACGCATGGGGGCAAAAACTGGATAAAGCT
ATGATCCTNACGCATCCTTTTTTCATTATG
back to top