EY753426

Overview
NameEY753426
Unique NameEY753426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753426 vs. ExPASy Swiss-Prot
Match: TMN1_YEAST (Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae GN=EMP70 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 55/176 (31.25%), Postives = 83/176 (47.16%), Query Frame = 1 
Query:  301 TQDGPKPLEVGRTLDM--TYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXVSEESGWKLVHGDVFRPPRNLVVLSXXXXXXXXXXXXXXXXXXXXXXXTLY-IGRGAIXTTFIVCYALTIFISGYVSGGMY 819
            T   P  L+ G   ++  TYSVK+  +  ++A R+D YL    ++  I WFS+ N  ++V+ L+ +V   L+R L++D+A+Y               E+SGWKL HGDVFR P   + LS                        L    RG++ T   + YAL  F+  Y S G+Y
Sbjct:  258 TTGSPLMLDEGNDNEVYFTYSVKFNESATSWATRWDKYLHV--YDPSIQWFSLINFSLVVVLLSSVVIHSLLRALKSDFARY-----NELNLDDDFQEDSGWKLNHGDVFRSPSQSLTLSILVGSGVQLFLMVTCSIFFAALGFLSPSSRGSLATVMFILYALFGFVGSYTSMGIY 426
The following BLAST results are available for this feature:
BLAST of EY753426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TMN1_YEAST3.695e-1531.25Transmembrane 9 superfamily member 1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753426 ID=EY753426; Name=EY753426; organism=Citrus sinensis; type=EST; length=880bp
CTTGGTGAGGTCCTGGGTGGAAATGAACTTATTGACAGTCAAATAGACAT
AAAGTTCCAAAGGAATGTTGACAAAGCCTCCATCTGTTCATTGGATCTTG
ATGAGGCAAAGGTCAAACAATTCAAAGATGCAATTGAGAACAATTATTGG
TTTGAATTCTTCTTGGATGATCTGCCTTTATGGGGCTTTGTTGGTGATCT
GCATCCTGATAAGAACAGTGATAATGGGAAGCACGTCCTCTACACACACA
AGATTATAAATTTTAAATACAATAAAGATCAGATTATTCATGTTAATCTC
ACTCAAGACGGCCCAAAGCCTCTGGAAGTTGGGAGGACACTGGACATGAC
ATACTCAGTCAAATGGACTCCAACTAATGTCACTTTTGCGCGTCGTTTTG
ATGTATATTTGGACTACCCTTTCTTTGAGCACCAGATCCATTGGTTCTCC
ATTTTCAATTCTTTCATGATGGTTATCTTCCTCACTGGTTTGGTATCAAT
GATATTGATGCGGACTCTTAGAAATGATTATGCCAAGTATGCACGGGAAG
ATGATGATCTAGAGACTTTGGAAAGAGATGTGAGTGAGGAATCTGGTTGG
AAACTTGTTCATGGGGATGTTTTCCGGCCTCCTCGTAATTTGGTTGTCCT
TTCAGCTGTTGTAGGCACTGGTGCACAGCTTGCATTGCTCGTTCTACTCG
TTATTCTGATGGCAATTGTGGGAACTTTGTATATTGGGAGAGGAGCCATT
GNGACTACTTTCATAGTATGTTATGCTCTTACCATCTTCATTTCTGGTTA
TGTGAGTGGTGGGATGTACTCACGCATGGGGGCAAAAACTGGATAAAGCT
ATGATCCTNACGCATCCTTTTTTCATTATG
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