EY753425

Overview
NameEY753425
Unique NameEY753425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13099 contig Csv1_Contig13099:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_STRR6 (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 57/157 (36.31%), Postives = 73/157 (46.50%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKF--SLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSL-----VNDALG 862
            MAK +V ++   DLKGKKV VR D NVPL             AA+PTIK++I+ G + IL SHLGR K  + K   SLAP+   L+  LG  VV         ++  +                    GKK   + PE G +  SL     VNDA G
Sbjct:    1 MAKLTVKDV---DLKGKKVLVRVDFNVPLKDGVITNDNRIT-AALPTIKYIIEQGGRAILFSHLGRVKEESDKAGKSLAPVAADLAAKLGQDVVFPGVTRGAELEAAINALEDGQVLLVENTRYEDVDGKKESKNDPELGKYWASLGDGIFVNDAFG 153          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_STRP2 (Phosphoglycerate kinase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 57/157 (36.31%), Postives = 73/157 (46.50%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKF--SLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSL-----VNDALG 862
            MAK +V ++   DLKGKKV VR D NVPL             AA+PTIK++I+ G + IL SHLGR K  + K   SLAP+   L+  LG  VV         ++  +                    GKK   + PE G +  SL     VNDA G
Sbjct:    1 MAKLTVKDV---DLKGKKVLVRVDFNVPLKDGVITNDNRIT-AALPTIKYIIEQGGRAILFSHLGRVKEESDKAGKSLAPVAADLAAKLGQDVVFPGVTRGAELEAAINALEDGQVLLVENTRYEDVDGKKESKNDPELGKYWASLGDGIFVNDAFG 153          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_RALSO (Phosphoglycerate kinase OS=Ralstonia solanacearum GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPK--GVTPKFSLAPLVPRLSELLGIQV 685
            +S   L GK+VF+RADLNVP              A+VP I+  +  GA V+++SHLGRP      P+ SLAP+  RLSELLG +V
Sbjct:   27 ISEGKLAGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIRAALDAGAAVMVTSHLGRPTEGEFKPEDSLAPVAVRLSELLGCEV 111          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_MYCLE (Phosphoglycerate kinase OS=Mycobacterium leprae GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 2
Query:  452 LKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLG--IQVVKADD 700
            + G+ V VR DLNVPL             A+VPT+K L++ GAK+++++HLGRPK G  PK SL P+   L E LG  +Q+V + D
Sbjct:   14 VSGRCVLVRCDLNVPLGDDGAITDLGRVTASVPTLKALLEAGAKIVVAAHLGRPKNGPDPKLSLEPVAAALGEQLGQNVQLVCSTD 99          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_MYCLB (Phosphoglycerate kinase OS=Mycobacterium leprae (strain Br4923) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 2
Query:  452 LKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPK-GVTPKFSLAPLVPRLSELLG--IQVVKADD 700
            + G+ V VR DLNVPL             A+VPT+K L++ GAK+++++HLGRPK G  PK SL P+   L E LG  +Q+V + D
Sbjct:   14 VSGRCVLVRCDLNVPLGDDGAITDLGRVTASVPTLKALLEAGAKIVVAAHLGRPKNGPDPKLSLEPVAAALGEQLGQNVQLVCSTD 99          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_LACH4 (Phosphoglycerate kinase OS=Lactobacillus helveticus (strain DPC 4571) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 44/89 (49.44%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELL 673
            MAK  V +L   D+KGKKV VR D NVP+             AA+PTIK++I++G K IL SHLGR K    K   SL P+  RLSELL
Sbjct:    1 MAKLIVDDL---DVKGKKVLVRVDFNVPIKDGVIGDDNRIV-AALPTIKYIIEHGGKAILLSHLGRVKSDADKKELSLKPVAERLSELL 85          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_LACAC (Phosphoglycerate kinase OS=Lactobacillus acidophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 43/89 (48.31%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGVTPK--FSLAPLVPRLSELL 673
            MAK  + +L   D+KGKKV VR D NVP+             AA+PTIK++I++G K IL SHLGR K    K   SL P+  RLSELL
Sbjct:    1 MAKLIISDL---DVKGKKVLVRVDFNVPIKDGVIGDDNRIV-AALPTIKYIIEHGGKAILLSHLGRVKSDADKKELSLKPVAERLSELL 85          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_CLOB8 (Phosphoglycerate kinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADD 700
            ++ GKKV VR D NVPL              A+PTIK+L++ GAKVIL SHLG+        SLAP+  RLSE+LG +VV A D
Sbjct:   12 EVSGKKVLVRCDFNVPLKDGVITDENRLV-GALPTIKYLVEKGAKVILCSHLGKDASK----SLAPVATRLSEMLGKEVVFARD 90          
The following BLAST results are available for this feature:
BLAST of EY753425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
PGK_STRR69.366e-1136.31Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRP29.366e-1136.31Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_RALSO9.366e-1145.88Phosphoglycerate kinase OS=Ralstonia solanacearum ... [more]
PGK_MYCLE9.366e-1144.19Phosphoglycerate kinase OS=Mycobacterium leprae GN... [more]
PGK_MYCLB9.366e-1144.19Phosphoglycerate kinase OS=Mycobacterium leprae (s... [more]
PGK_LACH49.366e-1149.44Phosphoglycerate kinase OS=Lactobacillus helveticu... [more]
PGK_LACAC9.366e-1148.31Phosphoglycerate kinase OS=Lactobacillus acidophil... [more]
PGK_CLOB89.366e-1148.81Phosphoglycerate kinase OS=Clostridium beijerincki... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753425 ID=EY753425; Name=EY753425; organism=Citrus sinensis; type=EST; length=877bp
CTCTCCTTAACGATAAGAGAAATCTCCAATATCACCCAATCGTTTTTCCT
CCTCGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGTCGATGGCGAAAAANAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCANAACATTACTGATGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATGGNTCCANNAGTAAAAAAGCTNGTANCCTCACTTNCTGAAAGCGG
GGGTTCTTCTTCTTGGAAACGTGAGGTTCTACAAGGAGGAGGAAAAAAAA
CGATCCTGAGTTTGCCAGAAGCTGGCCTCTTTGGCAGATCTCTTGTCAAT
GATGCTTTGGGACCGNTCCAGAGCCAT
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