EY753425

Overview
NameEY753425
Unique NameEY753425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13099 contig Csv1_Contig13099:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.456e-16
Identity = 51/107 (47.66%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            M K SV ++   D+KGK VF R D NVP+             AA+PTI++L   GAKV+L+SHLGRPKG VT +  L P+  RL ELLG +V KAD+     VKK +
Sbjct:    1 MNKKSVKDI---DVKGKVVFCRVDFNVPMKDGKVTDDTRIR-AALPTIEYLTGQGAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQI 103          

HSP 2 Score: 24.6386 bits (52), Expect = 1.456e-16
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  741 LKAG-VLLLGNVRFYKEEEK 797
            LK G VL+L NVRFY  EEK
Sbjct:  106 LKDGDVLVLENVRFYPGEEK 125          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_DESAH (Phosphoglycerate kinase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=pgk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.481e-16
Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            +   K V VR D N+P+             A +P + +L+  GAK++L+SH+GRPKG      SLAP   RLSELLG +VV  DDC+ P VK+ V
Sbjct:    8 EFNSKTVLVRVDYNLPMDENGNIADDNRIRATLPLVNYLVDKGAKIVLASHMGRPKGKPAASLSLAPAAKRLSELLGFEVVFVDDCIGPKVKERV 102          

HSP 2 Score: 23.8682 bits (50), Expect = 1.481e-16
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            ++LL N+RFYK EE+
Sbjct:  110 IILLENLRFYKGEEE 124          

HSP 3 Score: 21.9422 bits (45), Expect = 1.481e-16
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  793 KKNDPEFARS 822
            ++NDPEFARS
Sbjct:  123 EENDPEFARS 132          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.893e-16
Identity = 48/96 (50.00%), Postives = 57/96 (59.38%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVK 721
            L   D+KGK VF R D NVP+             AA+PTIKHL   GAKV+L+SHLGRPKG V  +  L P+  RL ELLG +V KAD+     VK
Sbjct:    6 LKDIDVKGKVVFCRVDFNVPMKDGEVTDDTRIR-AALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVK 100          

HSP 2 Score: 24.2534 bits (51), Expect = 1.893e-16
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            VL+L NVRFY  EEK
Sbjct:  111 VLVLENVRFYPGEEK 125          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.457e-16
Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = 2
Query:  413 MAKXSVGEL--SGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRP----------KGVTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            MAK ++G L  SG DLKGK+V VRAD NVPL             A++PTI+ L Q GAKVIL+SHLGRP          +      SLAP+  RL++LLG  V  A DC+ P  + +V
Sbjct:    1 MAKQTLGSLLSSGFDLKGKRVLVRADFNVPLDPQGNITDDTRIRASLPTIQALAQAGAKVILTSHLGRPIQKDKATGAIQIAREGNSLAPVAVRLAQLLGQPVAFAPDCIGPEAEAVV 118          

HSP 2 Score: 22.3274 bits (46), Expect = 2.457e-16
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEE 794
            V LL NVRF+ EEE
Sbjct:  126 VALLENVRFHPEEE 139          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.482e-16
Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVK 721
            M K +V ++   D+ GK+V VR D NVP+              A+PTI++LI + AKVIL SHLGRPKG   P +SL P+  RLSELL   V+ A+D +    K
Sbjct:    1 MKKKTVRDI---DVSGKRVLVRVDFNVPMDENKNITDDRRIREALPTIEYLINHNAKVILVSHLGRPKGKFNPDYSLKPVAKRLSELLKKPVIMAEDVIGEDAK 101          

HSP 2 Score: 26.9498 bits (58), Expect = 2.482e-16
Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  741 LKAG-VLLLGNVRFYKEEEK 797
            LK G VLLL NVRF+ EEEK
Sbjct:  107 LKEGEVLLLENVRFHAEEEK 126          

HSP 3 Score: 20.7866 bits (42), Expect = 2.482e-16
Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  793 KKNDPEFAR 819
            +KNDPEFA+
Sbjct:  125 EKNDPEFAK 133          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 58/151 (38.41%), Postives = 74/151 (49.01%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSLVNDALG 862
            M K S+ ++   DLKGK+VF R D NVP+             AA+PTI++LI+ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+   P  +++V                  G  K       E        VNDA G
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGKITDETRIR-AALPTIQYLIEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFG 147          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_HYDS0 (Phosphoglycerate kinase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.197e-16
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            DLKGK+V VR D NVP+             AA+PTI++L+   A VIL SHLGRPKG   K+SL P+  RLS  +   VV A DC+   ++ +V
Sbjct:   11 DLKGKRVLVRVDFNVPIDNQGNIEDDARIRAAIPTIEYLLDAKAIVILMSHLGRPKGFDEKYSLKPVAKRLSRYIHKDVVMAPDCIGKDMENIV 104          

HSP 2 Score: 24.2534 bits (51), Expect = 3.197e-16
Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            V++L N+RF+KEEE+
Sbjct:  112 VIMLENLRFHKEEEE 126          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16
Identity = 56/151 (37.09%), Postives = 67/151 (44.37%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSLVNDALG 862
            M+K S+  L   DL GK+V VR D NVPL             AA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  VVK + C+    K  V                + G  K       E        VNDA G
Sbjct:    1 MSKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGLITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGQVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEKNDTEFAKELASLAEVYVNDAFG 151          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16
Identity = 56/151 (37.09%), Postives = 67/151 (44.37%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSLVNDALG 862
            M+K S+  L   DL GK+V VR D NVPL             AA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  VVK + C+    K  V                + G  K       E        VNDA G
Sbjct:    1 MSKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGQITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGEVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEKNDTEFAKELASLAEVYVNDAFG 151          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16
Identity = 57/151 (37.75%), Postives = 74/151 (49.01%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSLVNDALG 862
            M K S+ ++   DLKGK+VF R D NVP+             AA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+   P  +++V                  G  K       E        VNDA G
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGKITDETRIR-AALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAELAKEFAALADIFVNDAFG 147          
The following BLAST results are available for this feature:
BLAST of EY753425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
PGK_BACP21.456e-1647.66Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_DESAH1.481e-1643.16Phosphoglycerate kinase OS=Desulfobacterium autotr... [more]
PGK_BACSU1.893e-1650.00Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_SYNJA2.457e-1645.76Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_THETN2.482e-1644.23Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_BACWK2.545e-1638.41Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]
PGK_HYDS03.197e-1645.74Phosphoglycerate kinase OS=Hydrogenobaculum sp. (s... [more]
PGK_PROMT3.324e-1637.09Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM13.324e-1637.09Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BACHK3.324e-1637.75Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753425 ID=EY753425; Name=EY753425; organism=Citrus sinensis; type=EST; length=877bp
CTCTCCTTAACGATAAGAGAAATCTCCAATATCACCCAATCGTTTTTCCT
CCTCGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGTCGATGGCGAAAAANAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCANAACATTACTGATGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATGGNTCCANNAGTAAAAAAGCTNGTANCCTCACTTNCTGAAAGCGG
GGGTTCTTCTTCTTGGAAACGTGAGGTTCTACAAGGAGGAGGAAAAAAAA
CGATCCTGAGTTTGCCAGAAGCTGGCCTCTTTGGCAGATCTCTTGTCAAT
GATGCTTTGGGACCGNTCCAGAGCCAT
back to top