EY753425

Overview
NameEY753425
Unique NameEY753425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13099 contig Csv1_Contig13099:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADD 700
            +    +KGKKV VR D NVPL              A+PTIK+L+ NGAKVIL SH+G+PKG   P+FSLAP+  RLSE+LG +VV A D
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGVITDENRLN-GAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAAD 95          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADD 700
            +    +KGKKV VR D NVPL              A+PTIK+L+ NGAKVIL SH+G+PKG   P+FSLAP+  RLSE+LG +VV A D
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGVITDENRLN-GAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAAD 95          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_GEOUR (Phosphoglycerate kinase OS=Geobacter uraniireducens (strain Rf4) GN=pgk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.120e-16
Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  446 ADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            +DL+ KK+F+R D NVPL             A +PTI + +   AKV+L+SHLGRPKG    K+S+AP   RLS LLG +V  A DC+   V K++
Sbjct:   10 SDLREKKIFMRVDFNVPLDEHQNITEDTRIRAVLPTINYALDYNAKVVLASHLGRPKGERNAKYSMAPAAKRLSRLLGKEVKLAPDCIGDGVSKII 105          

HSP 2 Score: 22.3274 bits (46), Expect = 9.120e-16
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            V++L N+RFY  EEK
Sbjct:  113 VVMLENLRFYPGEEK 127          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.124e-16
Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            MAK +V ++   D+KGK+V +R D NVP+             A VPTI +LI   A+VIL SHLGRPKG V  ++ + P+  RLSELLG  VVKA DC+    +  V
Sbjct:    1 MAKKTVRDI---DVKGKRVLLRVDFNVPMENGRVADDVKIKEA-VPTINYLIGQKARVILVSHLGRPKGRVDERYKMDPVARRLSELLGKTVVKAGDCVGEAARSAV 103          

HSP 2 Score: 25.0238 bits (53), Expect = 9.124e-16
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            V+LL NVRF+ EEEK
Sbjct:  111 VVLLENVRFHPEEEK 125          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.124e-16
Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLV 730
            D+KGK+VF R D NVP+             AA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RLSELLG  V K D+     VK+ +
Sbjct:   10 DVKGKRVFCRVDFNVPMENGAITDDTRIR-AALPTIRYLMEQGAKVILASHLGRPKGKVVEELRLNAVARRLSELLGKHVTKTDEAYGDAVKEAI 103          

HSP 2 Score: 25.409 bits (54), Expect = 9.124e-16
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            VLLL NVRFY  EEK
Sbjct:  111 VLLLENVRFYPGEEK 125          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 61/147 (41.50%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSL----VNDALG 862
            +   DLKGK+V +R D NVP+             AA+PTIK+ ++ GAKVIL SHLGRPKG  +P+FSLAP+  RLSELLG +V      +   VKK V                  G  K      PE   F  SL    VNDA G
Sbjct:    6 IKDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIR-AALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKND----PELAKFWASLADIHVNDAFG 147          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.185e-15
Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXX-AAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXV 718
            M K +V  L+ ADL GK+V VR D NVP+              AA+PTI+ LI+ GAKVIL SH+GRP G V     L P+  RLSELLG +V+   DC+   V
Sbjct:    1 MPKKTVANLTEADLAGKRVLVRVDFNVPMDKATGAISDDTRIRAALPTIEDLIKKGAKVILCSHMGRPDGQVKENLRLTPVAKRLSELLGQEVIMCPDCIGEGV 104          

HSP 2 Score: 20.7866 bits (42), Expect = 1.185e-15
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEE 794
            V LL N+RF+ EEE
Sbjct:  116 VALLENLRFHGEEE 129          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 61/143 (42.66%), Postives = 73/143 (51.05%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCMXPXVKKLVXXXXXXXXXXXWKREVLQGGGKKTILSLPEAGLFGRSL----VNDALG 862
            DLKGK+V +R D NVP+             AA+PTIK+ ++ GAKVIL SHLGRPKG  +P+FSLAP+  RLSELLG +V      +   VKK V                  G  K      PE   F  SL    VNDA G
Sbjct:   10 DLKGKRVIMRVDFNVPVKDGVVQDDTRIR-AALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKND----PELAKFWASLADIHVNDAFG 147          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_BIFAA (Phosphoglycerate kinase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 50/85 (58.82%), Postives = 56/85 (65.88%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADD 700
            DLKGK+V VRAD NVPL             AA+PTIK L + GAKVIL +HLGRPKG V P+ SLAP+  RL ELLGI V  A D
Sbjct:    9 DLKGKRVLVRADFNVPLDGTTITDDGRIK-AALPTIKALREQGAKVILMAHLGRPKGKVVPELSLAPVAARLGELLGITVPLAAD 92          
BLAST of EY753425 vs. ExPASy Swiss-Prot
Match: PGK_CHLPB (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.954e-15
Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  413 MAKXSVGELSGADLKGKKVFVRADLNVPLXXXXXXXXXXXXXAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCM 706
            M K S+ ++S    KG +V +R D NVPL              A+P+I  +I++G ++IL SHLGRPKG V P+ SL P+  RLSELL   VV A DC+
Sbjct:    1 MEKKSLYDIS---CKGSRVLMRVDFNVPLDEHAHITNDKRIIEALPSIHKIIEDGGRLILMSHLGRPKGKVVPELSLEPVAKRLSELLDTSVVMAGDCI 96          

HSP 2 Score: 23.8682 bits (50), Expect = 1.954e-15
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  753 VLLLGNVRFYKEEEK 797
            ++LL N+RF+ EEEK
Sbjct:  112 IMLLENLRFHPEEEK 126          

HSP 3 Score: 22.3274 bits (46), Expect = 1.954e-15
Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  793 KKNDPEFARSW-PLWQISCQ*CFGT 864
            +KNDPEFAR    + +I     FGT
Sbjct:  125 EKNDPEFARELASMGEIYVNDAFGT 149          
The following BLAST results are available for this feature:
BLAST of EY753425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
PGK_CLOPE7.404e-1652.81Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP17.404e-1652.81Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_GEOUR9.120e-1644.79Phosphoglycerate kinase OS=Geobacter uraniireducen... [more]
PGK_PELTS9.124e-1645.79Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_GEOSW9.124e-1647.37Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_THEP19.670e-1641.50Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_MICAN1.185e-1547.12Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGKT_THEMA1.263e-1542.66Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]
PGK_BIFAA1.649e-1558.82Phosphoglycerate kinase OS=Bifidobacterium adolesc... [more]
PGK_CHLPB1.954e-1544.44Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753425 ID=EY753425; Name=EY753425; organism=Citrus sinensis; type=EST; length=877bp
CTCTCCTTAACGATAAGAGAAATCTCCAATATCACCCAATCGTTTTTCCT
CCTCGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGTCGATGGCGAAAAANAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCANAACATTACTGATGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATGGNTCCANNAGTAAAAAAGCTNGTANCCTCACTTNCTGAAAGCGG
GGGTTCTTCTTCTTGGAAACGTGAGGTTCTACAAGGAGGAGGAAAAAAAA
CGATCCTGAGTTTGCCAGAAGCTGGCCTCTTTGGCAGATCTCTTGTCAAT
GATGCTTTGGGACCGNTCCAGAGCCAT
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