EY753420

Overview
NameEY753420
Unique NameEY753420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.837e-21
Identity = 61/175 (34.86%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  218 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            AAS+     G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   42 AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGP----------------LGEVVDPLYPGG 192          

HSP 2 Score: 57.3806 bits (137), Expect = 1.837e-21
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            +  PLGL  D ++  D K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  193 TFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.390e-21
Identity = 64/194 (32.99%), Postives = 87/194 (44.85%), Query Frame = 2
Query:  167 SAQSPTGSSRKG--SFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            SA   TG+ R      V +  ++     G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   23 SAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP----------------LGEVVDPLYPGG 192          

HSP 2 Score: 58.9214 bits (141), Expect = 2.390e-21
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL +D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  193 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.108e-21
Identity = 63/190 (33.16%), Postives = 87/190 (45.79%), Query Frame = 2
Query:  212 VRAASTPPVKQGADRPLWFA----------SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFN 718
            + AA+   +  G D  LW+           S Q+ SYL+G  PGDYG+D  GLS DPE    F   + L   EVI+GR+AMLGA+G + PE+L K  G+  +E    WF+ G  I   G  +Y  +P          +   ++ LMG  E  R                G +    G G+  YPGG  F+
Sbjct:   35 IAAATNGRITMGND--LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FARNRAL---EVIHGRWAMLGALGCVFPEVLQKWVGVEFKEP--VWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN--------------GLDGV--GEGNDLYPGGQYFD 198          

HSP 2 Score: 56.9954 bits (136), Expect = 3.108e-21
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query:  718 PLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            PLGL  D  +  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL+DH
Sbjct:  199 PLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDH 248          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.109e-21
Identity = 60/170 (35.29%), Postives = 81/170 (47.65%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFN 718
            G DR  +    S Q+ SYL+G  PGDYG+D  GLS DPE    F + + L   EVI+GR+AMLGA+G I PE+L K   +  +  + WF+ G  I   G  +Y  +P          +   ++ LMG  E  R      PG               G G+  YPGG  F+
Sbjct:   49 GPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN--GLPGV--------------GEGNDLYPGGQYFD 195          

HSP 2 Score: 56.225 bits (134), Expect = 3.109e-21
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  718 PLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            PLGL  D  +  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  196 PLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH 245          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 5.254e-21
Identity = 60/175 (34.29%), Postives = 79/175 (45.14%), Query Frame = 2
Query:  218 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            AAS      G DR ++    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y   P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   55 AASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP----------------LGEVTDPIYPGG 205          

HSP 2 Score: 56.6102 bits (135), Expect = 5.254e-21
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            +  PLGL  D  +  D K+KE+KNGR  M ++ G+FVQ +VT  G ++NL DH
Sbjct:  206 NFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 258          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 5.267e-21
Identity = 63/196 (32.14%), Postives = 88/196 (44.90%), Query Frame = 2
Query:  176 SPTGSSRKGS--FVVRAASTPPVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            SP     +G+  F +R  ++  V  G+     DR  +    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   11 SPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVTDPIYPGG 182          

HSP 2 Score: 57.3806 bits (137), Expect = 5.267e-21
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  183 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 235          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.835e-21
Identity = 61/175 (34.86%), Postives = 79/175 (45.14%), Query Frame = 2
Query:  218 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            AAS      G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y   P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   55 AASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP----------------LGEVTDPIYPGG 205          

HSP 2 Score: 55.4546 bits (132), Expect = 6.835e-21
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            +  PLGL  D  +  + K+KE+KNGR  M ++ G+FVQ +VT  G ++NL DH
Sbjct:  206 NFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 258          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.843e-21
Identity = 58/166 (34.94%), Postives = 77/166 (46.39%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   53 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGP----------------LGEVVDPLYPGG 194          

HSP 2 Score: 58.151 bits (139), Expect = 6.843e-21
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.843e-21
Identity = 59/161 (36.65%), Postives = 79/161 (49.07%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDP 691
            G+DR  +    S +  SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R    A  G +G    L    Y GGS DP
Sbjct:   51 GSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGEGPLGEAEDL---LYPGGSFDP 197          

HSP 2 Score: 58.151 bits (139), Expect = 6.843e-21
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  194 SFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 246          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.843e-21
Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYL-GGSGDP 691
            G DRP +    S+ + SYL G  PGDYG+D   +S DPE    F + + L   EVI+ R+AMLGA+G + PE+L K GL   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G++G     G +  L GG+ DP
Sbjct:   52 GPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGLKFGEA--VWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGE----GLDPLLPGGAFDP 197          

HSP 2 Score: 58.151 bits (139), Expect = 6.843e-21
Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            +  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G ++NL+DH
Sbjct:  194 AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 246          
The following BLAST results are available for this feature:
BLAST of EY753420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
CB29_MAIZE1.837e-2134.86Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB22_TOBAC2.390e-2132.99Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB23_HORVU3.108e-2133.16Chlorophyll a-b binding protein of LHCII type III,... [more]
CB23_SOLLC3.109e-2135.29Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB2A_PYRPY5.254e-2134.29Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB21_CUCSA5.267e-2132.14Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2A_PINSY6.835e-2134.86Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB2A_SPIOL6.843e-2134.94Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_SINAL6.843e-2136.65Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB21_PINTH6.843e-2135.80Chlorophyll a-b binding protein type I, chloroplas... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-E12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753420 ID=EY753420; Name=EY753420; organism=Citrus sinensis; type=EST; length=896bp
CTTATTCTTCAAAANCAGAAGCAGAAAGCCGAAGCACTTTTAATTTATCG
TATTGAAGTAGAGAAACAAGAGGAAAAAAGAAAATTAAAAAATGGCAACC
CAAGCTTTGGTTTCATCATCTCTTACATCTTCAGTGGAGACTGCGAGACA
AATTCTTGGAGCAAGATCAGCTCAATCCCCAACTGGGTCATCAAGAAAAG
GTTCCTTTGTTGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCAAGGAGCA
GACAGACCGTTGTGGTTTGCATCCAAACAAAGCCTTTCATACTTGGATGG
CAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTCTCTCAGACCCTG
AAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCCTACGGCGAGGTC
ATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGCCATTGCACCGGA
GATTCTTGGCAAGGCAGGCCTCATTCCGCAAGAAACTGCCCTGGCCTGGT
TCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAACTACTGGGCAGAC
CCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGGATTTGCCGAGCA
CCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGGGCAGGCAATACT
TCCTCGGATTCGAGAAATACTTGGGAGGATCCGGCGATCCGGCTTACCCT
GGAGGACCTCTATTCAACCTCTGGGTCTGGGGAAAGATGAGAAGTCAAGG
AAGGATTTCAAGCTCAAGGAAGTGAAGAATGGAAGATNGNNCATGNTNGC
AATCTTGGGGTACTTTGTTCAAGGTCTTGTTACAAGGAGTGGGGCCTTAC
AGAACCTATGGGATCACTGGCTGATCCTGTAACAACATGTTTTGAC
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