EY753420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 6.843e-21 Identity = 55/155 (35.48%), Postives = 74/155 (47.74%), Query Frame = 2 Query: 272 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R + LG DP YPGG Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGG 194 HSP 2 Score: 58.9214 bits (141), Expect = 6.843e-21 Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL +D ++ + K+KE+KNGR M ++ G+FVQ +VT G L+NL DH Sbjct: 195 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 6.845e-21 Identity = 57/166 (34.34%), Postives = 78/166 (46.99%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P +++ ++ LMG E R LG DP YPGG Sbjct: 50 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGP----------------LGEIVDPLYPGG 191 HSP 2 Score: 58.151 bits (139), Expect = 6.845e-21 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL +D + + K+KE+KNGR M ++ G+FVQ +VT G L+NL DH Sbjct: 192 SFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.871e-21 Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 263 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPG 703 W QS +YLDGSL GD GFDPL L+ DPE + +W +V+NGR+AMLG G + PE+L KAGL+ A W + G Y+A T + M+ + E RR+QD NPGS+ + F+ Y + YPG Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMS-STYVEIRRWQDIKNPGSVNQDPI--FKSYSLPPHECGYPG 166 HSP 2 Score: 33.4982 bits (75), Expect = 6.871e-21 Identity = 17/36 (47.22%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 760 KLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 K KE+ NGR M A LG+ VQ V G +NL H Sbjct: 180 KEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQH 215
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.158e-20 Identity = 59/178 (33.15%), Postives = 80/178 (44.94%), Query Frame = 2 Query: 209 VVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 V + S+ G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 37 VTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGG 190 HSP 2 Score: 57.3806 bits (137), Expect = 1.158e-20 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL D ++ + K+KE+KNGR M ++ G+FVQ +VT G L+NL DH Sbjct: 191 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 243
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.506e-20 Identity = 58/166 (34.94%), Postives = 77/166 (46.39%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 53 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGG 194 HSP 2 Score: 56.9954 bits (136), Expect = 1.506e-20 Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL +D ++ + K+K +KNGR M ++ G+FVQ +VT G L+NL DH Sbjct: 195 SFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.507e-20 Identity = 57/166 (34.34%), Postives = 76/166 (45.78%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 48 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGG 189 HSP 2 Score: 57.3806 bits (137), Expect = 1.507e-20 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL D ++ + K+KE+KNGR M ++ G+FVQ +VT G L+NL DH Sbjct: 190 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 242
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.549e-20 Identity = 61/183 (33.33%), Postives = 84/183 (45.90%), Query Frame = 2 Query: 194 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 RK + + S+ G+DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 35 RKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--GWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGP----------------LGEIVDPLYPGG 193 HSP 2 Score: 53.9138 bits (128), Expect = 2.549e-20 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL + ++ + K+KE+KNGR M ++ G+FVQ +VT G L++L DH Sbjct: 194 SFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADH 246
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.549e-20 Identity = 57/166 (34.34%), Postives = 77/166 (46.39%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGP----------------LGEVTDPLYPGG 194 HSP 2 Score: 57.3806 bits (137), Expect = 2.549e-20 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL D ++ + K+KE+KNGR M ++ G+FVQ +VT G L NL DH Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDH 247
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.549e-20 Identity = 59/183 (32.24%), Postives = 81/183 (44.26%), Query Frame = 2 Query: 194 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 RK + AS+ G DR + S ++ SYL G P DYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 36 RKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGIKFGEA--VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVIDPLYPGG 194 HSP 2 Score: 58.9214 bits (141), Expect = 2.549e-20 Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 S PLGL +D ++ + K+KE+KNGR M ++ G+FVQ +VT G L+NL DH Sbjct: 195 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.311e-20 Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 290 YLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWAD--PYTL---FVLEMALMGFAEHRR------FQDWANPG 631 YL+G + GDYG+DP GL PE K+ A+ E+I+ R+AMLGA G I PE L K G A+ WF+TG + G T NY+ P L V E+ L+G AE+ R F+D +PG Sbjct: 84 YLNGEVAGDYGYDPFGLGKKPENFA-----KYQAF-ELIHARWAMLGAAGFIIPEALNKYGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPG 203 HSP 2 Score: 53.9138 bits (128), Expect = 3.311e-20 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 718 PLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 PLGL KD + K+KE+KNGR M A+LG+F+Q VT G ++NL H Sbjct: 208 PLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKH 257 The following BLAST results are available for this feature:
BLAST of EY753420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753420 ID=EY753420; Name=EY753420; organism=Citrus sinensis; type=EST; length=896bpback to top |