EY753420

Overview
NameEY753420
Unique NameEY753420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.316e-20
Identity = 60/175 (34.29%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  218 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            AA++     G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   42 AAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGG 192          

HSP 2 Score: 54.6842 bits (130), Expect = 3.316e-20
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+K GR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  193 SFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADH 245          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.319e-20
Identity = 56/159 (35.22%), Postives = 76/159 (47.80%), Query Frame = 2
Query:  266 FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGP 709
            F+   +  YL G  PGDYG+D  GLS DP+    + E       E+I+ R+A+LGA+G + PE+L + AG+  Q     WF+ G  I   G  NY  +   +          +++ LMG AE  R    AN GS G   FL          D  YPGGP
Sbjct:   45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGILTPELLSQYAGV--QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR----ANGGSEG---FL-------DDLDTLYPGGP 181          

HSP 2 Score: 56.9954 bits (136), Expect = 4.319e-20
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query:  718 PLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            PLGL  D  +  + K+KE+KNGR  M + LG+FVQ +VT  G +QNL DH
Sbjct:  184 PLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDH 233          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.608e-20
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            G DR  +    S ++ SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+  + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   52 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELFARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVIDPLYPGG 193          

HSP 2 Score: 58.151 bits (139), Expect = 5.608e-20
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 246          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.352e-20
Identity = 52/150 (34.67%), Postives = 69/150 (46.00%), Query Frame = 2
Query:  287 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            SYL G  PGDYG+D  GLS DPE    F + + L   EVI+  +AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:    8 SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSTWAMLGALGCVFPELLSRNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVTDPIYPGG 133          

HSP 2 Score: 57.3806 bits (137), Expect = 7.352e-20
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  134 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 186          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.234e-19
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            G DR  +    S ++ SYL G  PGDYG+D   LS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGG 194          

HSP 2 Score: 58.151 bits (139), Expect = 1.234e-19
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.607e-19
Identity = 56/166 (33.73%), Postives = 73/166 (43.98%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPG 703
            G DR  W    S  + +YL G  PGDYG+D  GLS DPE    + E       EVI+ R+A+LGA+G + PE+L   AG+   E    WF+ G  I   G  +Y   P  +          +++ LMG  E  R     N G  G               DP YPG
Sbjct:   41 GPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYREL------EVIHARWALLGALGILTPELLSTYAGVKFGEP--VWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR----VNGGPAGEGL------------DPLYPG 182          

HSP 2 Score: 56.9954 bits (136), Expect = 1.607e-19
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D  +  + K+KE+KNGR  M +  G+FVQ +VT  G +QNL DH
Sbjct:  184 SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADH 236          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.097e-19
Identity = 55/155 (35.48%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  272 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   25 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVVDPLYPGG 155          

HSP 2 Score: 52.373 bits (124), Expect = 2.097e-19
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL +  ++  + K+KE+KNGR  M ++ G+FV  +VT  G L+NL DH
Sbjct:  156 SFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADH 208          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.721e-19
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 2
Query:  245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            G DR  +    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E   +WF+ G  I   G  +Y  +           ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   31 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--SWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGG 172          

HSP 2 Score: 55.8398 bits (133), Expect = 2.721e-19
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PL L  D ++  + K+KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  173 SFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 225          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.531e-19
Identity = 61/200 (30.50%), Postives = 86/200 (43.00%), Query Frame = 2
Query:  161 ARSAQSPTGSSRKGSFVVRAASTP--PVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            A +  S +  +R G   +R   T   PV  G+     DR  +    S ++ SYL G  PGDYG+D  GLS    T  F + + L   EVI+ R+ MLGA+G + PE+  + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   17 AVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFPELFARNGVKFGEA--VWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVIDPLYPGG 193          

HSP 2 Score: 56.6102 bits (135), Expect = 3.531e-19
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL  D ++  + ++KE+KNGR  M ++ G+FVQ +VT  G L+NL DH
Sbjct:  194 SFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 246          
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.531e-19
Identity = 58/183 (31.69%), Postives = 81/183 (44.26%), Query Frame = 2
Query:  194 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706
            RK +   +  S+     G DR  +    S ++ SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+  + G+   E    W + G  I   G  +Y  +P          ++  ++ LMG  E  R                     LG   DP YPGG
Sbjct:   36 RKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELFARNGVKFGEA--VWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGP----------------LGVVVDPLYPGG 194          

HSP 2 Score: 57.3806 bits (137), Expect = 3.531e-19
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867
            S  PLGL +D ++  + K+KE KNGR  M ++ G+F+Q +VT  G L+NL DH
Sbjct:  195 SFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADH 247          
The following BLAST results are available for this feature:
BLAST of EY753420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
CB22_MAIZE3.316e-2034.29Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB2_DUNTE4.319e-2035.22Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB24_PETSP5.608e-2033.73Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB22_CUCSA7.352e-2034.67Chlorophyll a-b binding protein of LHCII type 1 (F... [more]
CB25_PETSP1.234e-1933.73Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB2_CHLMO1.607e-1933.73Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB21_PEA2.097e-1935.48Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB21_SOYBN2.721e-1933.73Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB21_PETSP3.531e-1930.50Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB22_PETSP3.531e-1931.69Chlorophyll a-b binding protein 22L, chloroplastic... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-E12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753420 ID=EY753420; Name=EY753420; organism=Citrus sinensis; type=EST; length=896bp
CTTATTCTTCAAAANCAGAAGCAGAAAGCCGAAGCACTTTTAATTTATCG
TATTGAAGTAGAGAAACAAGAGGAAAAAAGAAAATTAAAAAATGGCAACC
CAAGCTTTGGTTTCATCATCTCTTACATCTTCAGTGGAGACTGCGAGACA
AATTCTTGGAGCAAGATCAGCTCAATCCCCAACTGGGTCATCAAGAAAAG
GTTCCTTTGTTGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCAAGGAGCA
GACAGACCGTTGTGGTTTGCATCCAAACAAAGCCTTTCATACTTGGATGG
CAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTCTCTCAGACCCTG
AAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCCTACGGCGAGGTC
ATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGCCATTGCACCGGA
GATTCTTGGCAAGGCAGGCCTCATTCCGCAAGAAACTGCCCTGGCCTGGT
TCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAACTACTGGGCAGAC
CCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGGATTTGCCGAGCA
CCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGGGCAGGCAATACT
TCCTCGGATTCGAGAAATACTTGGGAGGATCCGGCGATCCGGCTTACCCT
GGAGGACCTCTATTCAACCTCTGGGTCTGGGGAAAGATGAGAAGTCAAGG
AAGGATTTCAAGCTCAAGGAAGTGAAGAATGGAAGATNGNNCATGNTNGC
AATCTTGGGGTACTTTGTTCAAGGTCTTGTTACAAGGAGTGGGGCCTTAC
AGAACCTATGGGATCACTGGCTGATCCTGTAACAACATGTTTTGAC
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