EY753379

Overview
NameEY753379
Unique NameEY753379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_DICDI (Actin-related protein 2 OS=Dictyostelium discoideum GN=arpB PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.832e-53
Identity = 102/193 (52.85%), Postives = 137/193 (70.98%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERG 737
            +V DNGTG VK GFAG + P A+FPS+VGRP  R    +  +  KD  VGDEA   R +L + YP+E+GI+ NWDD+  +W +    +L+V+ P E  +LLTE P+NP ANR+KM + MFE +   A+YVAIQAVL+LYA G  TG+V+DSGDGV+H +P+YEGY++PH    LD+AGRD+T  L+K+L  RG
Sbjct:    7 IVMDNGTGFVKCGFAGANFPTAIFPSMVGRPILRSEEKVENVEIKDIMVGDEAAKLRSMLQITYPLENGIIRNWDDITHVWDYALKEKLKVSDPTECKILLTEPPMNPVANRQKMIECMFEKYGFQAVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHIIPVYEGYSIPHLTRRLDVAGRDVTRYLIKLLLLRG 199          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_DROME (Actin-related protein 2 OS=Drosophila melanogaster GN=Arp14D PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52
Identity = 109/241 (45.23%), Postives = 152/241 (63.07%), Query Frame = 3
Query:  147 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPN-GNCRDMKKTLLWCP---RLEQNLDCQHTFCVK 848
            D++    +VCDNGTG VK G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R +L + YP+E+G+V NWDDM  +W +TF   ++ + P    +LLTE P+NP  NREKM ++MFE +   + Y+AIQAVL+LYA G  +G+V+DSGDGV+H  P+YE +ALPH    LD+AGRD+T  L+K+L  RG     S +    R MK+ L +      +EQ L  + T  V+
Sbjct:    2 DSKGRNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLMVGDEASQLRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVE 242          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTT2_MACFA (Actin-related protein T2 OS=Macaca fascicularis GN=ACTRT2 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.131e-51
Identity = 104/217 (47.93%), Postives = 140/217 (64.52%), Query Frame = 3
Query:  150 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLP-PSPNGNCRDMKKTLLW 797
            A D   ++ DNG+G+ KAG +G+  PR +  SIVG  +      G  QK  +VG+EA  K   L L  PIE G+++ WDDME++W H F  EL V P + P+L TE  LNP+ NREKM ++MFE F VPA Y++ QAVL+LYAS   TG+V+DSGDGV+ TVPI+EGY+LPHA+  L +AGRD+T+ L ++L   G         G   D+KK L +
Sbjct:    6 ALDSPAVIFDNGSGLCKAGLSGEFGPRHIVSSIVGHLKFQAPSAGANQKKYFVGEEALYKLEALQLHSPIERGLITGWDDMERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAVLALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLHVAGRDITELLTQLLLASGHTFSCELDKGLVDDIKKKLCY 222          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP1_YEAST (Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.477e-51
Identity = 101/215 (46.98%), Postives = 149/215 (69.30%), Query Frame = 3
Query:  162 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERG--SLLPPSPNGNCRDMKKTLLW 797
            QP+V DNG+G++KAGF+G++ P+A+   +VG  ++  VM+   Q D ++G+ AQ  RG+L L+YPI+HG+V +WD ME IW +     L++    EHP+L+TEAP+NP  NRE+M Q++FETF+V A+YV+  AVLSLYASGRTTG V+D G+G   TVPIY+G+ALP +++ +D+ G D+T+ L   L +    SL   S     R MK+ + +
Sbjct:   13 QPVVIDNGSGIIKAGFSGEERPKALEYCLVGNTKYDKVMLEGLQGDTFIGNNAQKLRGLLKLRYPIKHGVVEDWDSMELIWSYVLNEVLQLQNIGEHPLLITEAPMNPLKNREQMAQVLFETFDVSALYVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQLRKSAGVSLFSSSEREIVRTMKEKVCY 227          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_SCHPO (Actin-related protein 2 OS=Schizosaccharomyces pombe GN=arp2 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.290e-51
Identity = 102/214 (47.66%), Postives = 145/214 (67.76%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPN-GNCRDMKKTLLW 797
            P+V DNGTG VK G+A D+ PR  FPSIVGRP  R       +  KD  VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P+NP ANREKM + MFE +    +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE   L H +  LD+AGRD T  L+ +L  +G     + +    R+MK+ L +
Sbjct:    5 PIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCY 218          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_CAEBR (Actin-related protein 2 OS=Caenorhabditis briggsae GN=arx-2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.574e-51
Identity = 103/200 (51.50%), Postives = 139/200 (69.50%), Query Frame = 3
Query:  147 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERG 737
            D++  + +V DNGTG VK G+AG + P  +FPS+VGRP  R T  +  +  KD  VG+E    R +L + YP+++GIV NWDDM  +W HTF  E L + P+E  +LLTE PLNP +NREKM Q+MFE +   ++YVA  AVL+LYA G  TG+V+DSGDGV+H  P+YEG+AL H    LD+AGRD+T  L+K+L +RG
Sbjct:    2 DSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMGHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVA--AVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRG 199          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTT2_HUMAN (Actin-related protein T2 OS=Homo sapiens GN=ACTRT2 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.250e-50
Identity = 102/217 (47.00%), Postives = 139/217 (64.06%), Query Frame = 3
Query:  150 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLP-PSPNGNCRDMKKTLLW 797
            A D   ++ DNG+G  KAG +G+  PR +  SIVG  +         QK  +VG+EA  K+  L L  P E G+++ WDD+E++W H F  EL V P + P+L TE  LNP+ NREKM ++MFE F VPA Y++ QAVL+LYAS   TG+V+DSGD V+ TVPI+EGY+LPHA+  L +AGRD+T+ LM++L   G   P     G   D+KK L +
Sbjct:    6 ALDSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKKYFVGEEALYKQEALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAVLALYASACVTGLVVDSGDAVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGHTFPCQLDKGLVDDIKKKLCY 222          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSJ (Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.633e-50
Identity = 103/233 (44.21%), Postives = 146/233 (62.66%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPN-GNCRDMKKTLLWCP---RLEQNLDCQHTFCVK 848
            +VCDNGTG VK GFAG++ P +VFP +VGRP  R+   +      D  VG      R  L + YP+ +GIV +WDDM  IW H FY+EL+V P E  +LLT+ PLNP  NREKM + MFE +N   +++ +QAVLSLYA G  TG+V+DSGDGV+H VP+ +G++ PH    +++AGR +T  L+ +L+ RG  +  S +    R++K+ L +     + E  L  + T  VK
Sbjct:    7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSADFETVREIKEKLCYLSYDYKREYQLGLETTILVK 239          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSI (Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.633e-50
Identity = 103/233 (44.21%), Postives = 146/233 (62.66%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPN-GNCRDMKKTLLWCP---RLEQNLDCQHTFCVK 848
            +VCDNGTG VK GFAG++ P +VFP +VGRP  R+   +      D  VG      R  L + YP+ +GIV +WDDM  IW H FY+EL+V P E  +LLT+ PLNP  NREKM + MFE +N   +++ +QAVLSLYA G  TG+V+DSGDGV+H VP+ +G++ PH    +++AGR +T  L+ +L+ RG  +  S +    R++K+ L +     + E  L  + T  VK
Sbjct:    7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSADFETVREIKEKLCYLSYDYKREYQLGLETTILVK 239          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTT1_HUMAN (Actin-related protein T1 OS=Homo sapiens GN=ACTRT1 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 8.105e-50
Identity = 98/200 (49.00%), Postives = 135/200 (67.50%), Query Frame = 3
Query:  150 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLP 749
            A D+  ++ DNG+G+ KAG +G+  PR V  S++G  +    +  + QK  +VG EA  K   L L YPIE G+V+ WDDMEK+W H F  EL V P + PVL+TE  LNP+  REK+ ++MFETF+VP  Y++  AV +LYAS   TG+V+DSGDGV+ TVPI+EGY+LPHA+  L +AGRD+T+ L ++L   G   P
Sbjct:    6 ALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQK-YFVGQEALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFP 204          
The following BLAST results are available for this feature:
BLAST of EY753379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 470
Match NameE-valueIdentityDescription
ARP2_DICDI7.832e-5352.85Actin-related protein 2 OS=Dictyostelium discoideu... [more]
ARP2_DROME6.630e-5245.23Actin-related protein 2 OS=Drosophila melanogaster... [more]
ACTT2_MACFA1.131e-5147.93Actin-related protein T2 OS=Macaca fascicularis GN... [more]
ARP1_YEAST1.477e-5146.98Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=... [more]
ARP2_SCHPO3.290e-5147.66Actin-related protein 2 OS=Schizosaccharomyces pom... [more]
ARP2_CAEBR9.574e-5151.50Actin-related protein 2 OS=Caenorhabditis briggsae... [more]
ACTT2_HUMAN1.250e-5047.00Actin-related protein T2 OS=Homo sapiens GN=ACTRT2... [more]
ARP2_ORYSJ1.633e-5044.21Actin-related protein 2 OS=Oryza sativa subsp. jap... [more]
ARP2_ORYSI1.633e-5044.21Actin-related protein 2 OS=Oryza sativa subsp. ind... [more]
ACTT1_HUMAN8.105e-5049.00Actin-related protein T1 OS=Homo sapiens GN=ACTRT1... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753379 ID=EY753379; Name=EY753379; organism=Citrus sinensis; type=EST; length=898bp
GGTTTTTGGTCCGNATTCCCAGGCCGACCCACGCGTCCGGCAGTACCAAT
TTCAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATCTTCGAA
TTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATG
CTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAG
GCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAGTATTGT
TGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATG
CCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAA
TACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAAAGAT
CTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACC
CAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAG
ATGACCCAAATTATGTTTGAAACCTTCAATGTGCCAGCCATGTACGTTGC
CATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTG
TGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTTGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAAAGAGGTTCATTGTTACCCC
CCAGCCCGAACGGAAATTGCCGTGACATGAAGAAAACCTTGCTATGGTGC
CCTAGACTTGAGCAAAACTTGGACTGCCAACACACCTTTTGTGTTAAAAA
ACTATGACCTGCCTGGGGCCAACCACCCCTTGGACTGAAAATATCCTT
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