EY753379

Overview
NameEY753379
Unique NameEY753379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.806e-49
Identity = 99/231 (42.86%), Postives = 151/231 (65.37%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERG-SLLPPSPNGNCRDMKKTLLWCPRLEQNLDCQHTFCVKKL 854
            P+V DNG+GM+KAG AG   P+ ++P+I+GR +        G  +  VGD+AQ  R  L + YP+E G++++W+DME +W H +   L++ P + PVL+TE  LNP ANR+++T++ FE   VPA Y++IQAVL+L+A+G TTG+VL+SG GV+ +VPI+EGY LPH +  LDLAG DLT+ LM ++   G  LL  S      D+K++  +     +    +   C++K+
Sbjct:    7 PVVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQS-RAAQGGLELCVGDQAQDWRSSLFISYPVERGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLSASDRKIVEDIKESFCYVAMNYEEEMAKKPDCLEKV 236          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.806e-49
Identity = 100/198 (50.51%), Postives = 130/198 (65.66%), Query Frame = 3
Query:  156 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLP 749
            D   ++ DNG+G+ K G +G+  PR V  S+VG P+         +K  +VG+EAQ     L L YPIE G+V+ WDDMEK+W   F  EL V P E PV +TE  LNP+  REK T+IMFE FNVPA+Y+   AV +L AS   TG+VLDSGDGV+ TVP+YEGY+LPHAI  L +AGRD+T+ L ++L  +G   P
Sbjct:    8 DNPAVIFDNGSGLCKVGISGEIEPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPQETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLLAKGYTFP 205          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.861e-49
Identity = 100/198 (50.51%), Postives = 129/198 (65.15%), Query Frame = 3
Query:  156 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLP 749
            D   ++ DNG+G+ K G +G+  PR V  S+VG P+         +K  +VG+EAQ     L L YPIE G+V+ WDDMEK+W   F  EL V P E PV +TE  LNP+  REK T+IMFE FNVPA+Y+   AV +L AS   TG+VLDSGDGV+ TVPIYEGY+LP AI  L +AGRD+T+ L ++L  +G   P
Sbjct:    8 DNPAVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFP 205          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.808e-48
Identity = 94/195 (48.21%), Postives = 129/195 (66.15%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP---RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERG 737
            P+V D GTG VK G AG++ P   FPSIVGRP         V    KD  +GDEA   R  L + YP+E+GI+ NW DME +W + F+ ++++    +  +LLTE P+NP  NREKM ++MFE ++   +YVAIQAVL+LYA G ++G+V+DSGDGV+H VP+YE   L H    LD+AGRD+T  L+ +L+ RG
Sbjct:    6 PIVLDQGTGFVKIGRAGENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRG 200          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.162e-46
Identity = 93/198 (46.97%), Postives = 129/198 (65.15%), Query Frame = 3
Query:  156 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLP 749
            D+  ++ DNG+G+ KAG +G+  PR V  S++G  +       + Q   +VG EA  K   L L YPI+ G+V+ WDDMEK+W H F  EL V P + PVL+TE  LNP+  REK+ ++MFE F+VP  Y++  AV +LYAS   TG+V+DSGDGV+  VPI+EGY+LPHA+  L  AGRD+T+ L ++L   G   P
Sbjct:    8 DVPAVIFDNGSGLCKAGVSGEIGPRHVINSVLGHRKFNMPSARLNQY--FVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHLTQLLFANGFNFP 203          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.100e-46
Identity = 89/195 (45.64%), Postives = 134/195 (68.72%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLL 746
            P+V DNG+GM+KAG AG   P+ V+P+I+GR + HT       +++  VGD+AQ +R  L++ YP+E G++S+W DME +W H +   L +   + PVL+TE  LNP A+R+ ++++ FE   VPA Y++ QAVL+L+A+G TTG+VL+SG G++  VPI+EGY L H +  L++AG DLT  LM +L   G +L
Sbjct:    7 PVVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTAD----SRQELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQAVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIML 197          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.025e-44
Identity = 90/211 (42.65%), Postives = 129/211 (61.14%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPNGNCRDMKK 785
            E  + +V D GTG  K GFAG   P     ++VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F  E+++APEEH VL+++ PL+P  NREK  +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP     LD AG DLT  L+ +L   G+       G   D+KK
Sbjct:   67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTMVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQDQMGIVEDIKK 277          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.749e-44
Identity = 90/211 (42.65%), Postives = 128/211 (60.66%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPNGNCRDMKK 785
            E  + +V D GTG  K GFAG   P     + VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F  E+++APEEH VL+++ PL+P  NREK  +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP     LD AG DLT  L+ +L   G+       G   D+KK
Sbjct:   67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTTVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQDQMGIVEDIKK 277          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACL7A_MOUSE (Actin-like protein 7A OS=Mus musculus GN=Actl7a PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.645e-44
Identity = 90/210 (42.86%), Postives = 127/210 (60.48%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPNGNCRDMK 782
            E  + +V D GTG  K GFAG   P     + VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F  E+++APEEH VL+++ PL+P  NREK  +++FETFN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP     LD AG DLT  LM ++   G        G   D+K
Sbjct:   72 EVTKAVVVDLGTGFCKCGFAGLPKPTHKISTTVGKPYMETAKTGDNRKETFVGHELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMNLMNNSGKHFSEDHLGIVEDIK 281          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACL7A_BOVIN (Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.645e-44
Identity = 91/216 (42.13%), Postives = 129/216 (59.72%), Query Frame = 3
Query:  138 KMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPNGNCRDMKK 785
            K    E  + +V D GTG  K GFAG   P     + VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F+ E+++APEEH VL+++ PL+P  NREK  +++FETF  PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP     LD AG DLT  LM ++   G        G   D+KK
Sbjct:   65 KKPKLELTKAVVVDLGTGYCKCGFAGLPKPTHRISTTVGKPYMETAKTGDNRKETFVGHELINPEVRLKLINPLRHGIIVDWDTVQDIWEYLFHQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFKTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMCLMNTAGKHFTEGQLGIVEDIKK 280          
The following BLAST results are available for this feature:
BLAST of EY753379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 470
Match NameE-valueIdentityDescription
ARPM1_HUMAN1.806e-4942.86Actin-related protein M1 OS=Homo sapiens GN=ARPM1 ... [more]
ACTT1_MOUSE1.806e-4950.51Actin-related protein T1 OS=Mus musculus GN=Actrt1... [more]
ACTT1_RAT6.861e-4950.51Actin-related protein T1 OS=Rattus norvegicus GN=A... [more]
ARP2_YEAST5.808e-4848.21Actin-related protein 2 OS=Saccharomyces cerevisia... [more]
ACTT1_MACFA4.162e-4646.97Actin-related protein T1 OS=Macaca fascicularis GN... [more]
ARPM1_MOUSE7.100e-4645.64Actin-related protein M1 homolog OS=Mus musculus G... [more]
ACL7A_MACFA1.025e-4442.65Actin-like protein 7A OS=Macaca fascicularis GN=AC... [more]
ACL7A_HUMAN1.749e-4442.65Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE... [more]
ACL7A_MOUSE6.645e-4442.86Actin-like protein 7A OS=Mus musculus GN=Actl7a PE... [more]
ACL7A_BOVIN6.645e-4442.13Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753379 ID=EY753379; Name=EY753379; organism=Citrus sinensis; type=EST; length=898bp
GGTTTTTGGTCCGNATTCCCAGGCCGACCCACGCGTCCGGCAGTACCAAT
TTCAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATCTTCGAA
TTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATG
CTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAG
GCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAGTATTGT
TGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATG
CCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAA
TACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAAAGAT
CTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACC
CAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAG
ATGACCCAAATTATGTTTGAAACCTTCAATGTGCCAGCCATGTACGTTGC
CATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTG
TGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTTGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAAAGAGGTTCATTGTTACCCC
CCAGCCCGAACGGAAATTGCCGTGACATGAAGAAAACCTTGCTATGGTGC
CCTAGACTTGAGCAAAACTTGGACTGCCAACACACCTTTTGTGTTAAAAA
ACTATGACCTGCCTGGGGCCAACCACCCCTTGGACTGAAAATATCCTT
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