EY753379

Overview
NameEY753379
Unique NameEY753379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.623e-29
Identity = 71/212 (33.49%), Postives = 122/212 (57.55%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDAYVG-------DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERG-SLLPP 752
            +++  LV D G+  V+AG+AG+D P+  FP+ +G    R   + +M   G K    G       +  +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE +++PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I+   LAG  +T    ++  E    L+PP
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPP 220          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.327e-27
Identity = 71/194 (36.60%), Postives = 109/194 (56.19%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--------PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKIL 725
            ++ D+G+G +KAG AG + P+ VFP+IV          P +    V +G    +            T  YPIE G + NW+ ++ +W     N  R   E  PV++TE PL   A+R+KM +I+FE  +VP++ +A Q  +SLYASG  TG+V+DSG G++   P ++G  LP +   L+ AG+DL+  L+K L
Sbjct:    6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD----------TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLSAYLLKSL 188          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.220e-21
Identity = 63/207 (30.43%), Postives = 101/207 (48.79%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY-------VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPP 752
            +++  LV D G+   + G+AG+D P+ V  +  G      V +     +         VGD A      + + +P+  GIV++WD ++ IW ++    L    + HP++LTE   N +AN+ K  +I FE+  VPA Y+   AV S +A+G+   +VLD G  V+   P+ +G  L         AG  L   + K+L  RG  L P
Sbjct:   14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTP 219          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 58/189 (30.69%), Postives = 103/189 (54.50%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKI 722
            PLV DNG+  ++AG+ G+  P+ VF ++V R R       + +    VG++   + G  ++ + P E  ++SNWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE +N P++   I  + S Y + +  ++GIVL+ G+  SH +P+  G  +      +   G   +  L+K+
Sbjct:   26 PLVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKL 209          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 61/200 (30.50%), Postives = 99/200 (49.50%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPP 752
            +++  +V D G+   + GF+G+D P+ V PS  G       + G    + Y+    +S  G + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + MFE+   PA Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L         +G  + D L + L ++   + P
Sbjct:    9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNFEVMP 200          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3
Query:  351 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 485
            YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct:    1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20
Identity = 75/211 (35.55%), Postives = 105/211 (49.76%), Query Frame = 3
Query:  159 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGSLLPPSPNGNCRDMKK 785
            ++ LV D G+  +KAG A  D +P  + PS + R      MV  G   A   D   +    +TL  PIE G++ +WD ME +  +  Y  L      E  +L T+    PKA RE++ Q+MFETFNV   Y + QAVLSLYA GR +G  +D G G     P+ EG     A    +L G +LT    K+  +      PS N +  D++K
Sbjct:    1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT----KLFAQELGKTNPSMNLSMSDVEK 197          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.761e-20
Identity = 45/118 (38.14%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  351 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLT 704
            +PI+HG+V +WD +E +W       L+V PE+ PVL++++P  P   REK+ +++FE   VPA ++A  A+L+L + G  +G+ +++G GV H  PIY G++   A   L++AG  L+
Sbjct:   37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLS 154          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 3
Query:  159 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGS 740
            ++ +V D G+ ++KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FNV   Y + QAVLSLYA GR +G  +D G G     P+ EG     A    D+ G DLT+   + L +  S
Sbjct:    1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSNS 182          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 3
Query:  159 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGS 740
            ++ +V D G+ ++KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FNV   Y + QAVLSLYA GR +G  +D G G     P+ EG     A    D+ G DLT+   + L +  S
Sbjct:    1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSNS 182          
The following BLAST results are available for this feature:
BLAST of EY753379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 470
Match NameE-valueIdentityDescription
ACL6A_MOUSE4.623e-2933.49Actin-like protein 6A OS=Mus musculus GN=Actl6a PE... [more]
ACTL8_HUMAN4.327e-2736.60Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2... [more]
ARP4_YARLI1.220e-2130.43Actin-related protein 4 OS=Yarrowia lipolytica GN=... [more]
ARP5_SCHPO1.593e-2130.69Actin-like protein arp5 OS=Schizosaccharomyces pom... [more]
ARP4_SCHPO1.593e-2130.50Actin-related protein 4 OS=Schizosaccharomyces pom... [more]
ACT1_PSEMZ1.593e-21100.00Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 S... [more]
ARP7_ARATH1.348e-2035.55Actin-related protein 7 OS=Arabidopsis thaliana GN... [more]
CT134_MOUSE1.761e-2038.14Putative uncharacterized actin family protein C20o... [more]
ARP7_ORYSJ3.923e-2033.67Actin-related protein 7 OS=Oryza sativa subsp. jap... [more]
ARP7_ORYSI3.923e-2033.67Actin-related protein 7 OS=Oryza sativa subsp. ind... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753379 ID=EY753379; Name=EY753379; organism=Citrus sinensis; type=EST; length=898bp
GGTTTTTGGTCCGNATTCCCAGGCCGACCCACGCGTCCGGCAGTACCAAT
TTCAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATCTTCGAA
TTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATG
CTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAG
GCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAGTATTGT
TGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATG
CCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAA
TACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAAAGAT
CTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACC
CAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAG
ATGACCCAAATTATGTTTGAAACCTTCAATGTGCCAGCCATGTACGTTGC
CATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTG
TGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTTGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAAAGAGGTTCATTGTTACCCC
CCAGCCCGAACGGAAATTGCCGTGACATGAAGAAAACCTTGCTATGGTGC
CCTAGACTTGAGCAAAACTTGGACTGCCAACACACCTTTTGTGTTAAAAA
ACTATGACCTGCCTGGGGCCAACCACCCCTTGGACTGAAAATATCCTT
back to top