EY753379

Overview
NameEY753379
Unique NameEY753379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13
Identity = 59/234 (25.21%), Postives = 104/234 (44.44%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTER-------------GSLLPPSPNGNCRDMKKTLLWCPRLEQNLDCQ 830
            +V D G    K GFAG+  PR + PS++ R                    A   + +  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F VP++ +A   +++L   G  + +VLD G   S  +PIYEG  + +    L L G+ L   L   L E+              S++   P G   D+K    +   L++ L  Q
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMPKPVRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDIKARTCFVSDLKRGLKIQ 227          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP4_DEBHA (Actin-related protein 4 OS=Debaryomyces hansenii GN=ARP4 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 44/202 (21.78%), Postives = 92/202 (45.54%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV------GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTERGS 740
            ++I  +V D+ +   + G+AGDD P+ + PS    P    + +      G  +     G+     R    +   ++  ++ +W+   + +H+ F + L +  +E P+L+TE        R+ + +  +E F+ PA+++A       +  GR   +V+D G       P+ +G +L    +  +  G+ L D +  +LT + S
Sbjct:   14 DEINAIVLDSSSFHTRIGYAGDDFPKIITPSSYASPNEDAMELDNKKKNGKSKSSKIFGESINIPRSNHNVSPILKDSVIIDWEAAIEQYHYYFDDVLTLNYKEQPILITEPVWCTPQYRQTLLETFYENFDFPALFLAKSPTCISFQQGRPNCLVVDIGHDSVSVTPVIDGISLLKNSMKTNYGGQYLNDQIEDMLTHKFS 215          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 59/234 (25.21%), Postives = 105/234 (44.87%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTER-------------GSLLPPSPNGNCRDMKKTLLWCPRLEQNLDCQ 830
            +V D G    K GFAG+  PR + PS++ +                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F VP++ +A   +++L   G  + +VLD G   S  +PIYEG  + +    L L G+ L   L   L E+              S++   P G   D+K    +   L++ L+ Q
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVSDLKRGLNIQ 227          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP4_CANAL (Actin-related protein 4 OS=Candida albicans GN=ARP4 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 43/193 (22.28%), Postives = 89/193 (46.11%), Query Frame = 3
Query:  153 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTE 731
            ++I  +V D G+   + G+AGDD P+ +  S  G+ ++         K    G+     R    +K  ++  I+ +WD   + + + F  +L+V   E P+L+TE      + R+++ +  FE      +Y+A     + +  GR+  +V+D G       P+ +G  L  + +  +  G+ L++ +   L +
Sbjct:   13 DEINAIVLDPGSYTTRIGYAGDDFPKVITSSYYGQVKN--------DKKKIFGESINVPRANYDIKPILKESIIVDWDAAIEQYQYYFDQQLKVVGPEQPILITEPIWTETSYRQQLVETFFENDEFRGIYIAKSPTCASFQQGRSNCLVVDLGHDSVLVTPVIDGICLLKSSMKTNYGGKFLSNEIQDYLID 197          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP5_HUMAN (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 56/200 (28.00%), Postives = 98/200 (49.00%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFA--GDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKIL 725
            PLV DNG+  V+AG+A  G D    PR  F ++  R R        G     VG+   S   +   L+ P +  +  N +  E +  ++F + L V+ +   +HP++LTEA  NP  +R+ M++++FE + +P +   I ++ S Y     +   +G+++ SG   +H +PI EG         ++L G      L ++L
Sbjct:   32 PLVLDNGSFQVRAGWACPGQDPGPEPRLQFRAVCARGRGGA----RGASGPQVGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSLFSFYHNKPKNSMCSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLL 226          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP4_USTMA (Actin-related protein 4 OS=Ustilago maydis GN=ARP4 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = 3
Query:  444 EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALM 716
            EHP+LLTE   N + +REK+T++ FET   PA Y+A ++VLS +A+G+ + +V+D G     T+PI +G+ L   I   +  G  +  AL+
Sbjct:  181 EHPLLLTEPAWNSRESREKLTELAFETLGSPAFYLANRSVLSSFAAGKPSSLVIDVGSTNVSTIPIVDGFILRKGIYRHNNGGEAINRALL 271          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/173 (24.86%), Postives = 82/173 (47.40%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK---ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 674
            +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G          G+  NWD +E  W + +  +L+V+PEE P+++T    N K   A  E+  ++ F+  NVP   + I+ +    + G+++  V+D G    +  PI +G  + +A++
Sbjct:    8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVV 180          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP5_MOUSE (Actin-related protein 5 OS=Mus musculus GN=Actr5 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 56/200 (28.00%), Postives = 101/200 (50.50%), Query Frame = 3
Query:  165 PLVCDNGTGMVKAGFA--GDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKIL 725
            PLV DNG+   +AG+A  G D    PR  F ++  R R  G   G G +   VG+   S   +   L+ P +  +  N +  E +  ++F + L V+ +   +HP++LTEA  NP  +R+ M++++FE + +P +   I ++ S Y     +  ++G+++ SG   +H +P+ EG         ++L G      L ++L
Sbjct:   32 PLVLDNGSFQARAGWACPGPDPGPEPRLQFRAVCARGRG-GARGGPGPQ---VGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYRIPKVAYGIDSLFSFYHNVPKNALSSGLIISSGYQCTHILPVLEGRLDAKNCKRINLGGSQAAGYLQRLL 226          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 51/202 (25.25%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPI--EHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY-----ASGRTT-----GIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKILTER 734
            +V DNG    K G A  D P  V P+ + + +         ++ A+VG++    R    L Y +  + G + NW   + +W + F  + +  + E   +++TE  +N ++ +E   +I+FE + V  +Y    A L+ +     +  RTT      I++D G   +H VP   G  +   I  +D+ G+ LT+ L ++++ R
Sbjct:    6 VVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYR 199          
BLAST of EY753379 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 45/206 (21.84%), Postives = 95/206 (46.12%), Query Frame = 3
Query:  168 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-----HTGVMVGMGQK-------DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILCLDLAGRDLTDALMKIL 725
            LV DNG+   + G++    P   F +++ +PR           G   +       +  VG++  +   +   LK P E  +++NW+  E+I+ + F        +  +HP++LTEA  NP   R++M +++FE + +P++   I A+ S           +  +++  G   +H +P+ +G      +  L++ G  +   L +++
Sbjct:    7 LVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGNDITNIEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRLNVGGYHIITYLFRLM 212          
The following BLAST results are available for this feature:
BLAST of EY753379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 470
Match NameE-valueIdentityDescription
ARP10_HUMAN4.645e-1325.21Actin-related protein 10 OS=Homo sapiens GN=ACTR10... [more]
ARP4_DEBHA7.923e-1321.78Actin-related protein 4 OS=Debaryomyces hansenii G... [more]
ARP10_BOVIN7.923e-1325.21Actin-related protein 10 OS=Bos taurus GN=ACTR10 P... [more]
ARP4_CANAL1.035e-1222.28Actin-related protein 4 OS=Candida albicans GN=ARP... [more]
ARP5_HUMAN2.305e-1228.00Actin-related protein 5 OS=Homo sapiens GN=ACTR5 P... [more]
ARP4_USTMA3.011e-1239.56Actin-related protein 4 OS=Ustilago maydis GN=ARP4... [more]
ARP7_YEAST5.136e-1224.86Actin-related protein 7 OS=Saccharomyces cerevisia... [more]
ARP5_MOUSE6.707e-1228.00Actin-related protein 5 OS=Mus musculus GN=Actr5 P... [more]
ARP6_DROME8.760e-1225.25Actin-like protein 13E OS=Drosophila melanogaster ... [more]
ARP5_DROME7.416e-1121.84Actin-related protein 5 OS=Drosophila melanogaster... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753379 ID=EY753379; Name=EY753379; organism=Citrus sinensis; type=EST; length=898bp
GGTTTTTGGTCCGNATTCCCAGGCCGACCCACGCGTCCGGCAGTACCAAT
TTCAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATCTTCGAA
TTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATG
CTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAG
GCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAGTATTGT
TGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATG
CCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAA
TACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAAAGAT
CTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACC
CAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAG
ATGACCCAAATTATGTTTGAAACCTTCAATGTGCCAGCCATGTACGTTGC
CATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTG
TGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTTGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAAAGAGGTTCATTGTTACCCC
CCAGCCCGAACGGAAATTGCCGTGACATGAAGAAAACCTTGCTATGGTGC
CCTAGACTTGAGCAAAACTTGGACTGCCAACACACCTTTTGTGTTAAAAA
ACTATGACCTGCCTGGGGCCAACCACCCCTTGGACTGAAAATATCCTT
back to top