EY753360

Overview
NameEY753360
Unique NameEY753360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6243 contig Csv1_Contig6243:65..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_SOLBU (ATP-dependent Clp protease proteolytic subunit OS=Solanum bulbocastanum GN=clpP PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 6.620e-37
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSR 643
            MPIG PKVL+R PG+    WVD++N LYRER++F+GQ I  + SNQ++  M+YL   D++K +YL++N PGG V P +AIYDTMQ ++  + T C+G A  +  F+LAGG+   R A P +R+ +  P  A    Q  +   EA EL+++R+T +R
Sbjct:    1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDENKELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPHARVMIHEPYSAFYMAQVGEFVMEAVELMKLRETLTR 156          

HSP 2 Score: 27.335 bits (59), Expect = 6.620e-37
Identity = 11/33 (33.33%), Postives = 20/33 (60.61%), Query Frame = 1
Query:  649 SRKTGQPFEKITKDLSRIKRFGSQEALEYGLID 747
            + +TG+PF  + +D+ R     + EA  YG++D
Sbjct:  159 AERTGKPFWVVHEDMERDIFMSATEAQAYGIVD 191          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_HELAN (ATP-dependent Clp protease proteolytic subunit OS=Helianthus annuus GN=clpP PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 6.623e-37
Identity = 73/166 (43.98%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P +A+YDTMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PAG+ +     +   E  ELL++R+T +R  + +   P+
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDTQDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPHARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPV 166          

HSP 2 Score: 26.5646 bits (57), Expect = 6.623e-37
Identity = 10/34 (29.41%), Postives = 21/34 (61.76%), Query Frame = 1
Query:  652 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 753
            ++TG+P   +++D+ R     + EA  YG++D +
Sbjct:  160 QRTGKPVWVVSEDMERDVFMSATEAQAYGIVDLV 193          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJB (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. GN=clpP1 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.599e-37
Identity = 81/171 (47.37%), Postives = 105/171 (61.40%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            MPIG P+V YR PGE   QW+ L + LY+ER++FIG+ ID+  +N I+  MLYL+S D  K + +YIN PGG VT  +AIYDTM  +K  + T CVG A  +  FLLA G KG R A+P SRI L  P+ G  +GQA DI   A E LRV+   +         PL ++ R
Sbjct:    1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTTGQPLEKIER 171          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_NASOF (ATP-dependent Clp protease proteolytic subunit OS=Nasturtium officinale GN=clpP PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 75/166 (45.18%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL    D+K +YL+IN PGG V   +A+YDTMQ ++  V T C+G A  +A F+L GG    R A P +R+ +  PA +    Q  +   EA+ELL+VR+T +R  + +   P+
Sbjct:    1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAVYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKVRETITRVYVQRTGKPI 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_GOSHI (ATP-dependent Clp protease proteolytic subunit OS=Gossypium hirsutum GN=clpP PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 77/166 (46.39%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   +D+K +YL+IN PGG V P +AIYDTMQ ++  V T C+G A  +  FLLAGGE   R A P +R+ +  PA +    Q  +   EA+ELL++R++ +R  + +   PL
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDTKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_GOSBA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium barbadense GN=clpP PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 77/166 (46.39%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   +D+K +YL+IN PGG V P +AIYDTMQ ++  V T C+G A  +  FLLAGGE   R A P +R+ +  PA +    Q  +   EA+ELL++R++ +R  + +   PL
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDTKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_EUCGG (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus globulus subsp. globulus GN=clpP PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   +D+K +YL+IN PGG V P +AIYDTMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL++R+T +R  + +   PL
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDNKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJA (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 81/171 (47.37%), Postives = 105/171 (61.40%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            MPIG P+V YR PGE   QW+ L + LY+ER++FIG+ ID+  +N I+  MLYL+S D  K + +YIN PGG VT  +AIYDTM  +K  + T CVG A  +  FLLA G KG R A+P SRI L  P+ G  +GQA DI   A E LRV+   +         PL ++ R
Sbjct:    1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGMIQGQASDIEIRARETLRVKRRMNELLAQMTGQPLEKIER 171          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_PHAAO (ATP-dependent Clp protease proteolytic subunit OS=Phalaenopsis aphrodite subsp. formosana GN=clpP PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.138e-36
Identity = 77/166 (46.39%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQI+  M+YL   DD++ +YL+IN PGG V P +AIYDTMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA D   EA+ELL++R+T ++  + +  +PL
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRTGNPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_NANDO (ATP-dependent Clp protease proteolytic subunit OS=Nandina domestica GN=clpP PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.138e-36
Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   D++K +YL+IN PGG V P +AIYDTMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL++R+T +R  + +  +PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPL 166          
The following BLAST results are available for this feature:
BLAST of EY753360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SOLBU6.620e-3744.87ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HELAN6.623e-3743.98ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNJB9.599e-3747.37ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_NASOF1.637e-3645.18ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_GOSHI1.637e-3646.39ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_GOSBA1.637e-3646.39ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EUCGG1.637e-3645.78ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNJA1.637e-3647.37ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_PHAAO2.138e-3646.39ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NANDO2.138e-3645.78ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753360 ID=EY753360; Name=EY753360; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAA
AGATTCAATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCT
GAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGA
TAAACCAATAAGGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAG
TGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGG
AATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGA
AGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTG
ATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTGGGGATGTT
ACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGT
TGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAG
CAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCT
TTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGACATTCGTAA
TGAAGCAGATGAGCTTCTTAGAGTCAGAGATACATTTTCAAGGAGTTGTC
TAGGAAAACAGGTCAGCCCTTTGAGAAGATTACGAAGGATTTAAGTAGGA
TTAAACGCTTTGGTTCCCAGGAGGCTCTTGAATATGGGCTGATAGATCGT
ATAATCAGGCCACCTCGTATTAAGGAGATTGCCTCGTAAAGAGCTTGGAC
AGGTCTGGNNTTAGGTATCATTGATTCTCCACTGATAGACTGAGTCATCA
ATATTTATCT
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