EY753360

Overview
NameEY753360
Unique NameEY753360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_COXBN (ATP-dependent Clp protease proteolytic subunit OS=Coxiella burnetii (strain Dugway 5J108-111) GN=clpP PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.855e-27
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  179 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSR 643
            M +  P V+ +T  GE ++   D+++ L ++RVIF+   +++  +N  +A ML+L+S + +K + LYIN PGG VT  +AIYDTMQ +K  V T C+G A      LLAGG KG R  +P S + +    G  +GQ  DI+  A +  RV D  ++
Sbjct:    1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQ 153          

HSP 2 Score: 34.6538 bits (78), Expect = 4.855e-27
Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 753
            L++ TG+  E++ KD +R      +EA+EYGLID I
Sbjct:  155 LAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSI 190          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_COXB2 (ATP-dependent Clp protease proteolytic subunit OS=Coxiella burnetii (strain CbuG_Q212) GN=clpP PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.855e-27
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  179 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSR 643
            M +  P V+ +T  GE ++   D+++ L ++RVIF+   +++  +N  +A ML+L+S + +K + LYIN PGG VT  +AIYDTMQ +K  V T C+G A      LLAGG KG R  +P S + +    G  +GQ  DI+  A +  RV D  ++
Sbjct:    1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQ 153          

HSP 2 Score: 34.6538 bits (78), Expect = 4.855e-27
Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 753
            L++ TG+  E++ KD +R      +EA+EYGLID I
Sbjct:  155 LAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSI 190          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_COXB1 (ATP-dependent Clp protease proteolytic subunit OS=Coxiella burnetii (strain CbuK_Q154) GN=clpP PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.855e-27
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  179 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSR 643
            M +  P V+ +T  GE ++   D+++ L ++RVIF+   +++  +N  +A ML+L+S + +K + LYIN PGG VT  +AIYDTMQ +K  V T C+G A      LLAGG KG R  +P S + +    G  +GQ  DI+  A +  RV D  ++
Sbjct:    1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKDINLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQ 153          

HSP 2 Score: 34.6538 bits (78), Expect = 4.855e-27
Identity = 16/36 (44.44%), Postives = 24/36 (66.67%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 753
            L++ TG+  E++ KD +R      +EA+EYGLID I
Sbjct:  155 LAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSI 190          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_SHEWM (ATP-dependent Clp protease proteolytic subunit OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=clpP PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 66/166 (39.76%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  194 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            P V+ +T  GE S+   D+++ L +ERVIF+   ++E  +N I+A +L+L+S +  + + LYIN PGG VT  +AIYDTMQ +K  V T C+G A  +  FLLAGG KG R  +P SR+ +  P G  +GQA D    A E+L +++  +         PL  + R
Sbjct:   14 PMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESENPDQEISLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRVMIHQPLGGFQGQASDFAIHAQEILGIKNKLNNILAEHTGQPLEVIER 176          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_RICRS (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia rickettsii (strain Sheila Smith) GN=clpP PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 628
            D+++ L +ER+IF+   +++  +N I+A +L+L++ +  K +Y+YIN PGG VT  LAIYDTMQ +K  V T C+G A  +   LL GGEKG R ++P SRI +  P+G  +GQA DI   A E L+++
Sbjct:   19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEIHAQETLKIK 147          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_RICPU (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia peacockii (strain Rustic) GN=clpP PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 628
            D+++ L +ER+IF+   +++  +N I+A +L+L++ +  K +Y+YIN PGG VT  LAIYDTMQ +K  V T C+G A  +   LL GGEKG R ++P SRI +  P+G  +GQA DI   A E L+++
Sbjct:   19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEIHAQETLKIK 147          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_RICCN (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia conorii GN=clpP PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 628
            D+++ L +ER+IF+   +++  +N I+A +L+L++ +  K +Y+YIN PGG VT  LAIYDTMQ +K  V T C+G A  +   LL GGEKG R ++P SRI +  P+G  +GQA DI   A E L+++
Sbjct:   19 DIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYKGQATDIEIHAQETLKIK 147          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_PSYCK (ATP-dependent Clp protease proteolytic subunit OS=Psychrobacter cryohalolentis (strain K5) GN=clpP PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 59/149 (39.60%), Postives = 94/149 (63.09%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRR 688
            D+++ L RERVIF+   +++  +N I+A +L+L++ +  K ++LYIN PGG V+  LAI+DTM  +K  V T C+G AY +  FLLA GEKG R A+  +R+ +  P+G A+GQA DI   A E+L+ R   +     +   P+ ++ +
Sbjct:   37 DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDIHLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEK 185          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_CAEEL (ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Caenorhabditis elegans GN=clpp-1 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.297e-27
Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 2
Query:  185 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 628
            +G P V+    G+G   + D+++ L R+R++ +   +D+  ++ ++A +L+L S    K +++YIN PGG VT  LAIYDT+Q + +PV T  +G A  +   LL  GEKG RSA+P SRI +  P+G A+G   DI   A+E+ R++
Sbjct:   24 VGIPFVI-DNEGKGERTY-DIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDIVIRAEEITRLK 169          

HSP 2 Score: 31.5722 bits (70), Expect = 6.297e-27
Identity = 13/32 (40.62%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  658 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 753
            TG  +++I K L R +   + EAL++GL+D+I
Sbjct:  180 TGMSYDEIEKTLDRDRFMSAHEALKFGLVDQI 211          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_BURXL (ATP-dependent Clp protease proteolytic subunit 1 OS=Burkholderia xenovorans (strain LB400) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.301e-27
Identity = 54/130 (41.54%), Postives = 86/130 (66.15%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 631
            D+++ L RER++F+   ++E+ ++ I+A +L+L+S +  K +  YIN PGG V   LAIYDTMQ +K  V T C GFA  +  FLL  G++G R A+P +RI +  P+G ++G A D+  +A E+L +R+
Sbjct:   29 DIYSRLLRERIVFLVGPVNEQSASVIVAQLLFLESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRGKRYALPNARIMIHQPSGGSQGTAADVEIQAKEVLYLRE 158          

HSP 2 Score: 29.261 bits (64), Expect = 6.301e-27
Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            ++ +TG+  E+I +D  R     +  A  YGL+D ++
Sbjct:  164 MAERTGRSIEEIARDTDRDNFMSAHAAKTYGLVDEVL 200          
The following BLAST results are available for this feature:
BLAST of EY753360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_COXBN4.855e-2738.46ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_COXB24.855e-2738.46ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_COXB14.855e-2738.46ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHEWM5.279e-2739.76ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RICRS5.279e-2744.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RICPU5.279e-2744.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RICCN5.279e-2744.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PSYCK5.279e-2739.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CAEEL6.297e-2738.51ATP-dependent Clp protease proteolytic subunit, mi... [more]
CLPP1_BURXL6.301e-2741.54ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753360 ID=EY753360; Name=EY753360; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAA
AGATTCAATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCT
GAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGA
TAAACCAATAAGGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAG
TGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGG
AATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGA
AGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTG
ATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTGGGGATGTT
ACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGT
TGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAG
CAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCT
TTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGACATTCGTAA
TGAAGCAGATGAGCTTCTTAGAGTCAGAGATACATTTTCAAGGAGTTGTC
TAGGAAAACAGGTCAGCCCTTTGAGAAGATTACGAAGGATTTAAGTAGGA
TTAAACGCTTTGGTTCCCAGGAGGCTCTTGAATATGGGCTGATAGATCGT
ATAATCAGGCCACCTCGTATTAAGGAGATTGCCTCGTAAAGAGCTTGGAC
AGGTCTGGNNTTAGGTATCATTGATTCTCCACTGATAGACTGAGTCATCA
ATATTTATCT
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