EY753360

Overview
NameEY753360
Unique NameEY753360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6243 contig Csv1_Contig6243:65..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_DRIGR (ATP-dependent Clp protease proteolytic subunit OS=Drimys granadensis GN=clpP PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.088e-35
Identity = 74/166 (44.58%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P +AIYDTMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +       +   EA+ELL++R+T +R  + +  +PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_CITSI (ATP-dependent Clp protease proteolytic subunit OS=Citrus sinensis GN=clpP PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.495e-35
Identity = 72/166 (43.37%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARG-QADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV YR+PG+    WVD++N LYRER++F+GQ ++ + SNQ++  M+YL   +++K +YL+IN PGG V P +AIYDTMQ ++  V T C+G A  +  FLLA G    R A P +R+ +  P GA  G Q  +   + +ELLR+R+  +   + +   PL
Sbjct:    1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHARVMIHQPIGAFYGAQTGEFILDTEELLRLREILTMVYVQRSGKPL 166          

HSP 2 Score: 24.6386 bits (52), Expect = 3.495e-35
Identity = 9/34 (26.47%), Postives = 21/34 (61.76%), Query Frame = 1
Query:  652 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 753
            +++G+P   +++D+ R     + EA  +GL+D +
Sbjct:  160 QRSGKPLWVVSEDMERDTFMSATEAQAHGLVDLV 193          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMP (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.495e-35
Identity = 63/136 (46.32%), Postives = 93/136 (68.38%), Query Frame = 2
Query:  224 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 631
            GS +  D+++ L RER+IF+G+ +  + +N+I+A +L+L++ D  K +Y+YIN PGG V   L I+DTMQ +K  + T CVG A  +  FLLA G KG RS++  SRI +  P G ARGQA DIR +ADE+L +++
Sbjct:   11 GSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILYLKE 146          

HSP 2 Score: 38.5058 bits (88), Expect = 3.495e-35
Identity = 20/46 (43.48%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  643 ELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEI 780
            ELS +TG+  E I  D  R      QEA+EYGLID ++    +K I
Sbjct:  151 ELSERTGKELETIKGDTDRDFYMSPQEAVEYGLIDLVLDKKPVKNI 196          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_ARAHI (ATP-dependent Clp protease proteolytic subunit OS=Arabis hirsuta GN=clpP PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 74/166 (44.58%), Postives = 107/166 (64.46%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL    D+K +YL+IN PGG V   +AIYDTMQ ++  V T  +G A  +A F+L GG    R A P +R+ +  PA +    Q  +   EA+ELL++R+T +R  + +   P+
Sbjct:    1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKIRETITRVYVQRTGKPI 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.553e-35
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 2
Query:  224 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD 631
            GS +  D+++ L RER+IF+G+ +  E +N+I+A +L+L++ D  K +Y+YIN PGG V   L I+DTMQ +K  + T CVG A  +  FLLA G KG RS++  SRI +  P G ARGQA DIR +ADE+L +++
Sbjct:   11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILFLKE 146          

HSP 2 Score: 37.3502 bits (85), Expect = 4.553e-35
Identity = 18/44 (40.91%), Postives = 26/44 (59.09%), Query Frame = 1
Query:  643 ELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 774
            ELS +TG+ +E I +D  R       EA+EYGLID ++    +K
Sbjct:  151 ELSERTGKDYETIKEDTDRDFYMSPSEAVEYGLIDLVLDKKPVK 194          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.267e-35
Identity = 74/166 (44.58%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE S  W+D++N LYRER++F+GQ+ID E SNQ++  M+YL +  + K +YL+IN PGG V P +AIYDTMQ ++  V T C+G A  +  F+L GG+   R A P +R+ +  P A     Q  +   EA+ELL++R+  +R    +   PL
Sbjct:    1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_POPAL (ATP-dependent Clp protease proteolytic subunit OS=Populus alba GN=clpP PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.267e-35
Identity = 74/166 (44.58%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE S  W+D++N LYRER++F+GQ+ID E SNQ++  M+YL +  + K +YL+IN PGG V P +AIYDTMQ ++  V T C+G A  +  F+L GG+   R A P +R+ +  P A     Q  +   EA+ELL++R+  +R    +   PL
Sbjct:    1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_CHLAT (ATP-dependent Clp protease proteolytic subunit OS=Chlorokybus atmophyticus GN=clpP PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.267e-35
Identity = 69/169 (40.83%), Postives = 107/169 (63.31%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLR 685
            MPIG PKV YR PGE    +VD++N LYRER++F+G+++D+E +NQ++  M++L+S DD+K ++ YIN PGG +   L +YD +Q +   V T C+G A  +A F+LAGG  G R   P +R+ L  P G   G+A  +  E+ E+ R+R+  +     +   P+ R+R
Sbjct:    1 MPIGIPKVAYRIPGESVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNSGLGVYDMIQHINVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYAKRTGQPIERIR 169          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=clpP PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.879e-35
Identity = 72/166 (43.37%), Postives = 105/166 (63.25%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE    W+D++N LYRER++F+GQ ++ E SNQ++  M+YL   D++K +Y +IN PGG V P +AIYDTMQ +   V T C+G A  +  F+L GG    R A P +R+ +  PA A    QA +   EA+ELL++R+  ++  + +   PL
Sbjct:    1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDENKDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPHARVMIHQPAAAFYEAQAGEFVMEAEELLKLREIITKVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_NYMAL (ATP-dependent Clp protease proteolytic subunit OS=Nymphaea alba GN=clpP PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34
Identity = 73/166 (43.98%), Postives = 107/166 (64.46%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   D+++ +YL+IN PGG V P +AIYD MQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL++R+  +R  + +   PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPL 166          
The following BLAST results are available for this feature:
BLAST of EY753360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_DRIGR3.088e-3544.58ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CITSI3.495e-3543.37ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_PROMP3.495e-3546.32ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_ARAHI4.033e-3544.58ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_PROM94.553e-3547.06ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_POPTR5.267e-3544.58ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_POPAL5.267e-3544.58ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLAT5.267e-3540.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_VITVI6.879e-3543.37ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NYMAL1.173e-3443.98ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753360 ID=EY753360; Name=EY753360; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAA
AGATTCAATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCT
GAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGA
TAAACCAATAAGGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAG
TGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGG
AATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGA
AGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTG
ATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTGGGGATGTT
ACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGT
TGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAG
CAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCT
TTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGACATTCGTAA
TGAAGCAGATGAGCTTCTTAGAGTCAGAGATACATTTTCAAGGAGTTGTC
TAGGAAAACAGGTCAGCCCTTTGAGAAGATTACGAAGGATTTAAGTAGGA
TTAAACGCTTTGGTTCCCAGGAGGCTCTTGAATATGGGCTGATAGATCGT
ATAATCAGGCCACCTCGTATTAAGGAGATTGCCTCGTAAAGAGCTTGGAC
AGGTCTGGNNTTAGGTATCATTGATTCTCCACTGATAGACTGAGTCATCA
ATATTTATCT
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