EY753360

Overview
NameEY753360
Unique NameEY753360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6243 contig Csv1_Contig6243:65..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_NUPAD (ATP-dependent Clp protease proteolytic subunit OS=Nuphar advena GN=clpP PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34
Identity = 73/166 (43.98%), Postives = 107/166 (64.46%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   D+++ +YL+IN PGG V P +AIYD MQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL++R+  +R  + +   PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_CHLSC (ATP-dependent Clp protease proteolytic subunit OS=Chloranthus spicatus GN=clpP PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34
Identity = 77/166 (46.39%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD+ N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P L IYDTMQ +   V T C+G A  +  F+L GGE   R A P +RI +  PA +    QA +   EA+ELL++R+T +R  + +  +PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARIMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPL 165          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_ZYGCR (ATP-dependent Clp protease proteolytic subunit OS=Zygnema circumcarinatum GN=clpP PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.532e-34
Identity = 67/166 (40.36%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE    W+D++N LYR+R++F+GQ++D+E +NQ++  M+YL+  + SK +Y+YIN PGG V   +++YD MQ +   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   GQA +   EA+E+L+++D  ++  + +   P+
Sbjct:    1 MPIGVPKVPFRIPGEEDASWIDVYNRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQSKDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPHARVMIHQPASSFYEGQAGECMIEAEEVLKLKDCVTKVYMQRTGKPM 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_MESVI (ATP-dependent Clp protease proteolytic subunit OS=Mesostigma viride GN=clpP PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.532e-34
Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRLRRI*VGLNALVPRRLLNMG 739
            MPIG PKV YR PGE    +VD++N LYRER++F+G+++D+E +NQ++  M++L+S DD+K ++ YIN PGG +   L +YD +Q +   V T C+G A  +A F+LAGG  G R   P +R+ L  P G   G+A  +  E+ E+ R+R+  +   + +    L ++R+     N + PR+    G
Sbjct:    1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRPRQAKEYG 187          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_PHYPA (ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens GN=clpP PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.001e-34
Identity = 73/167 (43.71%), Postives = 111/167 (66.47%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWN-ALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PGE    W+D++N  LYRER++F+GQ++D+E +NQ++  M+YL+  D++K +YLYIN PGG V   +++YD MQ +   V T C+G A  +  F+LAGGE   R A+P +R+ +  PA +   GQA +   EA+E+L++RD  +R  + +   PL
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDENKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEVLKLRDYITRVYVQRIGKPL 167          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=clpP PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.001e-34
Identity = 70/166 (42.17%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MP+G PKV +R PGE    WVDL+N LYR+R++F+GQ+++ E SNQI+  M+YL   D +K  YL+IN PGG V P + ++DTMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA + ++G+  +   E+ ELL +R+T ++  + +   PL
Sbjct:    1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGTKDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus GN=clpP3 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.218e-34
Identity = 60/133 (45.11%), Postives = 91/133 (68.42%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFS 640
            D+++ L RER+IF+G +++++ ++ ++A ML+L++ D  K + LYIN PGG VT  LAIYDTMQ +   + T C G A  +  FLLAGG KG R A+P SRI +  P G A+GQA +I  +A E+L +++T +
Sbjct:   41 DIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLN 173          

HSP 2 Score: 40.0466 bits (92), Expect = 2.218e-34
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            L+  TGQ  EKI++D  R      QEA+EYGLID+++
Sbjct:  176 LAEHTGQSLEKISEDTDRDHFLSPQEAVEYGLIDKVV 212          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_HUPLU (ATP-dependent Clp protease proteolytic subunit OS=Huperzia lucidula GN=clpP PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 69/166 (41.57%), Postives = 107/166 (64.46%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R PG+    W+D++N L+RER++F+GQ +D+E +NQ++  M+Y +  DDS+ +YLY+N PGG V   ++IYD MQ +   V T C+G A  +  F+LAGGE   R A+P +R+ +  PA +   GQ  +   EA+E+L++RD  ++    +   PL
Sbjct:    1 MPIGVPKVPFRLPGDEDAVWIDVYNRLFRERLLFLGQQVDDELANQLICIMIYPNGEDDSRDMYLYVNSPGGAVFAGISIYDAMQFVVPDVQTICIGLAASMGSFVLAGGEITKRIALPHARVMIHQPASSYYEGQVGECIMEAEEVLKIRDCITKVYAQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_ACOGR (ATP-dependent Clp protease proteolytic subunit OS=Acorus gramineus GN=clpP PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34
Identity = 72/166 (43.37%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKVL+ +PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   D ++  +L+IN PGG V P + +YDTMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL++R+T +R  + +   PL
Sbjct:    1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_ACOCL (ATP-dependent Clp protease proteolytic subunit OS=Acorus calamus GN=clpP PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34
Identity = 72/166 (43.37%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   D ++  +L+IN PGG V P + +YDTMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL++R+T +R  + +   PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPL 166          
The following BLAST results are available for this feature:
BLAST of EY753360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_NUPAD1.173e-3443.98ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLSC1.173e-3446.39ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ZYGCR1.532e-3440.36ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MESVI1.532e-3438.50ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHYPA2.001e-3443.71ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CUCSA2.001e-3442.17ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMA2.218e-3445.11ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP_HUPLU2.614e-3441.57ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOGR3.414e-3443.37ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOCL3.414e-3443.37ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753360 ID=EY753360; Name=EY753360; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAA
AGATTCAATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCT
GAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGA
TAAACCAATAAGGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAG
TGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGG
AATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGA
AGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTG
ATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTGGGGATGTT
ACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGT
TGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAG
CAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCT
TTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGACATTCGTAA
TGAAGCAGATGAGCTTCTTAGAGTCAGAGATACATTTTCAAGGAGTTGTC
TAGGAAAACAGGTCAGCCCTTTGAGAAGATTACGAAGGATTTAAGTAGGA
TTAAACGCTTTGGTTCCCAGGAGGCTCTTGAATATGGGCTGATAGATCGT
ATAATCAGGCCACCTCGTATTAAGGAGATTGCCTCGTAAAGAGCTTGGAC
AGGTCTGGNNTTAGGTATCATTGATTCTCCACTGATAGACTGAGTCATCA
ATATTTATCT
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