EY753360

Overview
NameEY753360
Unique NameEY753360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6243 contig Csv1_Contig6243:65..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_AMBTC (ATP-dependent Clp protease proteolytic subunit OS=Amborella trichopoda GN=clpP PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34
Identity = 73/166 (43.98%), Postives = 107/166 (64.46%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MP+G PKV +R+PGE    WVD++N L+RER++F+GQ ++ E SNQI+  M+YL   DD++ +YL+IN PGG V P +AIYD MQ +   V T C+G A  +  F+LAGGE   R A P +R+ +  PA +     A +   EA ELL++R+T +   + +  +PL
Sbjct:    1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPHARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.907e-34
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  179 MPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFS 640
            MPI  P  L       G G   + D+++ L RER+IF+G  +D+  ++ ++A ML+L++ D  K + +Y+N PGG VT  LAIYDTMQ +   V T C G A  +  FLL+GG KG R A+P +RI +  P G A+GQA DI  +A E+L +++T +
Sbjct:    1 MPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLN 156          

HSP 2 Score: 40.4318 bits (93), Expect = 4.907e-34
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            L+  TGQP +KI++D  R       EA+EYGLIDR++
Sbjct:  159 LAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_PIPCE (ATP-dependent Clp protease proteolytic subunit OS=Piper cenocladum GN=clpP PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 73/166 (43.98%), Postives = 106/166 (63.86%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSRSCLGKQVSPL 673
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQI+  M+YL   D ++ +YL+IN PGG V P +AIYDTMQ +   V T C+G A  +  F+L GGE   R A P + + +  PA +       +   EA+ELL++R+T +R  + +  +PL
Sbjct:    1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGTRDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHAWVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPL 166          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.379e-34
Identity = 74/184 (40.22%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  143 RNDKPIRGRI-AMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFSRSCLGKQVSPLRRL 682
            R+  PI+ R  A MPI  P  L       G G   + D+++ L RER+IF+G  +D+  ++ ++A ML+L++ D  K + +YIN PGG VT  LAIYDTMQ +   V T C G A  +  FLL+GG KG R A+P +RI +  P G A+GQA DI  +A E+L +++T +         PL ++
Sbjct:    5 RSHHPIQNRWRAEMPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKI 187          

HSP 2 Score: 37.3502 bits (85), Expect = 6.379e-34
Identity = 16/33 (48.48%), Postives = 22/33 (66.67%), Query Frame = 1
Query:  658 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            TGQP +KI +D  R       EA++YGLIDR++
Sbjct:  180 TGQPLDKIAEDTDRDYFLSPAEAVQYGLIDRVV 212          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 6.391e-34
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  179 MPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFS 640
            MP+  P  L       G G   + D+++ L RER+IF+G  +D+  ++ ++A ML+L++ D  K + +YIN PGG VT  LAIYDTMQ +   V T C G A  +  FLL+GG KG R A+P +RI +  P G A+GQA DI  +A E+L +++T +
Sbjct:    1 MPVSAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLN 156          

HSP 2 Score: 39.6614 bits (91), Expect = 6.391e-34
Identity = 17/37 (45.95%), Postives = 25/37 (67.57%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            ++  TGQP +KI++D  R       EA+EYGLIDR++
Sbjct:  159 MAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 8.336e-34
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 2
Query:  194 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFS 640
            P V+ +T G G   + D+++ L ++R+IF+G  +D++ +N I+A ML+L+S D  K ++LYIN PGG VT  +AIYDTMQ ++ PV T CVG A  +   LLA G +G R A+P +RI +  P G  +GQA DI   A E+LR+R+T +
Sbjct:    5 PMVVEQT-GRGERAY-DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQPWGGFQGQATDINIHAQEILRLRETLN 151          

HSP 2 Score: 36.5798 bits (83), Expect = 8.336e-34
Identity = 17/38 (44.74%), Postives = 24/38 (63.16%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 759
            L+  TGQ  EKI  D  R    GS+EA +YG++D I++
Sbjct:  154 LASHTGQTLEKIATDTERDFFMGSEEAKKYGIVDDIVK 191          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP1_MYXXD (ATP-dependent Clp protease proteolytic subunit 1 OS=Myxococcus xanthus (strain DK 1622) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.412e-33
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 2
Query:  179 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 628
            MP+  P V+ +T  GE S+   D+++ L ++R++ +G  ID++ +N I+A +L+L+S D  K + LYIN PGG VT  LAIYDTMQ +K PV T CVG A  +   LL  G KG R A+P SRI +  P G  RGQA DI  +A E+LR++
Sbjct:    4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMK 149          

HSP 2 Score: 35.8094 bits (81), Expect = 1.412e-33
Identity = 16/40 (40.00%), Postives = 23/40 (57.50%), Query Frame = 1
Query:  652 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 771
            + TGQ  E++ KD  R    G+ EA  YG+ID I  P ++
Sbjct:  158 KHTGQSIERVEKDTDRDYFMGASEAKAYGIIDEIQNPRKV 197          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.413e-33
Identity = 60/133 (45.11%), Postives = 91/133 (68.42%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDTFS 640
            D+++ L ++R+IF+G  +D+E +N I+A +L+L+S D  K +  YIN PGG VT  +A+YDTMQ +K  V T C+G A  +   LLA G KG R ++P SRI +  P G A+GQA DI+ +A+E+LR+++  S
Sbjct:   19 DIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLS 151          

HSP 2 Score: 36.965 bits (84), Expect = 1.413e-33
Identity = 16/37 (43.24%), Postives = 24/37 (64.86%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            LS+ TGQ F+KI++D  R       +A EYGL+D ++
Sbjct:  154 LSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVV 190          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_EUBR3 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=clpP PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.843e-33
Identity = 57/129 (44.19%), Postives = 91/129 (70.54%), Query Frame = 2
Query:  242 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 628
            D+++ L ++R+IF+G+ ++E  ++ ++A +L+L+S D +K ++LYIN PGG VT  LAIYDTMQ +K  V T C+G A  +  FLLAGG KG R A+P + I +  P+G A+GQA +I+  A+ +L+ +
Sbjct:   19 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAKGQATEIQIAAENILKTK 147          

HSP 2 Score: 39.2762 bits (90), Expect = 1.843e-33
Identity = 18/37 (48.65%), Postives = 23/37 (62.16%), Query Frame = 1
Query:  646 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 756
            L+  TG+P+E I  D  R     +QEA EYGLID +I
Sbjct:  154 LAANTGKPYETIAADTERDNYMSAQEAAEYGLIDSVI 190          
BLAST of EY753360 vs. ExPASy Swiss-Prot
Match: CLPP_SORBI (ATP-dependent Clp protease proteolytic subunit OS=Sorghum bicolor GN=clpP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.393e-33
Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 2
Query:  179 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDTFSR 643
            MPIG PKV YR PG+    WVDL+N +YRER +F+GQ I  E +N I   M+YL   D +  ++L+IN PGG +   +AI+DTMQ++   + T C+G A  +A F+L GGE   R A P +RI L  PA A  R +  +   E +EL +VR+  +R
Sbjct:    1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITR 156          

HSP 2 Score: 29.6462 bits (65), Expect = 2.393e-33
Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 1
Query:  655 KTGQPFEKITKDLSRIKRFGSQEALEYGLID 747
            +TG+PF  +++D+ R     + EA  YGL+D
Sbjct:  161 RTGKPFWVVSEDMERDVFMSADEAKAYGLVD 191          
The following BLAST results are available for this feature:
BLAST of EY753360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_AMBTC4.459e-3443.98ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_SYNS94.907e-3442.04ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_PIPCE5.823e-3443.98ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNPX6.379e-3440.22ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_SYNSC6.391e-3442.04ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_PELCD8.336e-3444.97ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_MYXXD1.412e-3346.36ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_DESAH1.413e-3345.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EUBR31.843e-3344.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SORBI2.393e-3344.23ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753360 ID=EY753360; Name=EY753360; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGCTTCTCTGAGCTGTAACCTCAAGCTTTTTTCTGGATTAA
AGATTCAATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCT
GAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCCGGCATTCGTAATGA
TAAACCAATAAGGGGACGAATTGCAATGATGCCGATTGGGACACCAAAAG
TGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGG
AATGCCCTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGA
AGAATTTAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTG
ATGATTCCAAAAGGGTTTATTTGTACATCAATGGTCCCGGTGGGGATGTT
ACTCCCACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGT
TGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAG
CAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCT
TTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCTGATGACATTCGTAA
TGAAGCAGATGAGCTTCTTAGAGTCAGAGATACATTTTCAAGGAGTTGTC
TAGGAAAACAGGTCAGCCCTTTGAGAAGATTACGAAGGATTTAAGTAGGA
TTAAACGCTTTGGTTCCCAGGAGGCTCTTGAATATGGGCTGATAGATCGT
ATAATCAGGCCACCTCGTATTAAGGAGATTGCCTCGTAAAGAGCTTGGAC
AGGTCTGGNNTTAGGTATCATTGATTCTCCACTGATAGACTGAGTCATCA
ATATTTATCT
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