EY753357

Overview
NameEY753357
Unique NameEY753357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:1..865. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.479e-16
Identity = 58/182 (31.87%), Postives = 92/182 (50.55%), Query Frame = 2
Query:  215 PGELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 751
            PGE       RA  AEF +  +F++    + M  G +  +   +  G+   + +    +FV V   A +SGGH+NPAVT G F+   ++L RA+ Y + Q LGA+    ++K   G      +   A  +++G T  + +  E + TF LVYTV+ +A D K+      + I+APL IG  V
Sbjct:   11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIV 183          

HSP 2 Score: 21.1718 bits (43), Expect = 4.479e-16
Identity = 8/17 (47.06%), Postives = 11/17 (64.71%), Query Frame = 3
Query:  780 FTRTGINPARSFGAAII 830
            F    +NPA SFG A++
Sbjct:  193 FDGASMNPAVSFGPAVV 209          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.494e-16
Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 2
Query:  344 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFFVSLGHYPI 781
            +G  G+A AFG  +  + Y   GISGGH NPAV+L L +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  E I T   +  +  +T +   A        AP+ IGF +  + L   P+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPV 178          

HSP 2 Score: 33.8834 bits (76), Expect = 4.494e-16
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  756 LFHLATIPFTRTGINPARSFGAAI 827
            L HL +IP T T +NPARS G A+
Sbjct:  170 LIHLVSIPVTNTSVNPARSTGVAL 193          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.569e-16
Identity = 61/177 (34.46%), Postives = 97/177 (54.80%), Query Frame = 2
Query:  245 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AENIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 751
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +FV V   A ISGGH+NPAV  G F+   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     E + TF LVYTV+ +A D K+     ++ I+AP+ IGF V
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIV 181          

HSP 2 Score: 23.483 bits (49), Expect = 7.569e-16
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  780 FTRTGINPARSFGAAII 830
            FT   +NPA SFG A++
Sbjct:  191 FTGASMNPAVSFGPAVV 207          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.569e-16
Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = 2
Query:  245 RAGIAEFIATFLFLYISVLTVMGV--VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 751
            +A +AEFIAT LF++  V + +    +         G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   + Y V Q LGA     +++ ++  GQ     G       G ++ +G+  E + TF LVYTV+ +A D K+ +    +  +AP+ IGF V
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ-YVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIV 180          

HSP 2 Score: 27.335 bits (59), Expect = 7.569e-16
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 3
Query:  765 LATIPFTRTGINPARSFGAAI 827
            LA  PF+   +NPARSFG A+
Sbjct:  185 LAAGPFSGGSMNPARSFGPAV 205          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.279e-15
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2
Query:  242 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 751
            +R  + E + TF  +++ V        S T  S   +  IA+ FG  +  +      +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +   APL +G A+
Sbjct:   23 WRMLLGELVGTFFLIFVGV-------GSTTSGS---VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAI 176          

HSP 2 Score: 28.4906 bits (62), Expect = 1.279e-15
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  762 HLATIPFTRTGINPARSFGAAII 830
            HL  I  +   +NPARSFG A++
Sbjct:  180 HLCAIKLSGASMNPARSFGPAVV 202          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15
Identity = 62/184 (33.70%), Postives = 88/184 (47.83%), Query Frame = 2
Query:  221 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFFVSLGH 772
            EL+S SF+RA  AEF AT  +++      +G     T    + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +  G + G     E   T   V  +F+  D +R+ R   V     L +GF+   ++LGH
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFS---LTLGH 172          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 60/184 (32.61%), Postives = 89/184 (48.37%), Query Frame = 2
Query:  221 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFFVSLGH 772
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ Y+V Q LGA+ GA V+         G LA   N +  G + G     E   T   V  +F+  D +R+ R   V     L +GF+   ++LGH
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFS---LTLGH 172          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 60/184 (32.61%), Postives = 89/184 (48.37%), Query Frame = 2
Query:  221 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFFVSLGH 772
            EL+S SF+RA  AEF A+  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YMV Q LGA+ GA V+         G LA   N +  G + G     E   T   V  +F+  D +R+ R   V     L +GF+   ++LGH
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFS---LTLGH 172          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.690e-15
Identity = 59/184 (32.07%), Postives = 88/184 (47.83%), Query Frame = 2
Query:  221 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFFVSLGH 772
            EL+S SF+RA  AEF AT  +++  + + +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     E   T   V  +F+  D +R+ R   V     L +GF+   ++LGH
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFS---LTLGH 170          
BLAST of EY753357 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.741e-15
Identity = 58/177 (32.77%), Postives = 86/177 (48.59%), Query Frame = 2
Query:  218 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAENIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIG 742
            GE     F+R  + E + TFLF++I V   M    + TK ST G    A A G  + V V  TAG  ISGGH+NPAVTL L +   ++L R+  Y+  Q L +     +++   G      LA   + +A G     G+ AE + TF L++ +++     R       P+L  L +G
Sbjct:   10 GEASEPDFFRGVLGELVLTFLFVFIGVGAAM-TDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGG-----LATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGAGPLLTGLLVG 180          

HSP 2 Score: 21.9422 bits (45), Expect = 4.741e-15
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  795 INPARSFGAAI 827
            +NPARSFG A+
Sbjct:  194 MNPARSFGPAV 204          
The following BLAST results are available for this feature:
BLAST of EY753357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
TIP13_ARATH4.479e-1631.87Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQPZ_BRUSU4.494e-1632.89Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
TIP1_MEDSA7.569e-1634.46Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP23_MAIZE7.569e-1633.72Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQP_DROME1.279e-1530.59Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
MIP_CANFA1.612e-1533.70Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_SHEEP2.105e-1532.61Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_BOVIN2.750e-1532.61Lens fiber major intrinsic protein OS=Bos taurus G... [more]
MIP_RAT4.690e-1532.07Lens fiber major intrinsic protein (Fragment) OS=R... [more]
TIP43_MAIZE4.741e-1532.77Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753357 ID=EY753357; Name=EY753357; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGCAACATCAAACGGCCACAAACAAAAAAGCAGTGCTTCTT
ATTGACTATTTTGTGTTTTTGAGGGAGTAGCAGAAATGGAAGGCAAAGAA
GAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGG
GACGGCGGCTCANACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGG
CGCCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCC
GGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACT
GACAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCA
TTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTAC
TGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGG
CCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGG
TGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTC
ATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGC
TCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGAATATTGGTACTT
TTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCC
AGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGT
GTTTTTTGTTTCACTTGGCCACTATCCCATTTACCCGAACTGGCATCAAC
CCAGCGAGGAGCTTTGGAGCTGCAATCATCTTCACAAGGACCCGGGGTGG
GAAGACCACTGGATT
back to top