EY753325

Overview
NameEY753325
Unique NameEY753325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13088 contig Csv1_Contig13088:1..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753325 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 52/178 (29.21%), Postives = 76/178 (42.70%), Query Frame = 3 
Query:   36 PGRPRVRIVRTHGQTPRQ-TERNDNSRLSVAAASGGMKDPLISNRMKDEVDNDDRPGSKRRKKDNFNANASPVEKLTGEHRVVQTLSEVDFVNDGYRWRKYGQKLVKGNPNPRNYYRCSNS---GCPAKKHVERASHDPKLVITTYEGRH---DHDMPPSRTVTPNVAGTKNSKTAHN 548
            PG  +   +R  G T  Q TE    ++L   A  GG +  L +   +        P  +RRK +            TG   +          +D + WRKYGQK + G+  PR YYRC++     CPAKK V+R + DP     TY G H   +   P + + TP+     +  T H+
Sbjct:   91 PGLMQEYWLRYGGSTSSQGTEAMFQTQLM--AVDGGGERNLTAAVERSGASGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPP--------DDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATPSTIPISSVTTGHS 258
The following BLAST results are available for this feature:
BLAST of EY753325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK55_ARATH7.090e-1129.21WRKY transcription factor 55 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-E03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753325 ID=EY753325; Name=EY753325; organism=Citrus sinensis; type=EST; length=872bp
TTACTGGTNCGCCTGCCAGTACTGGTCCGGNATTCCCGGGCCGACCCCGC
GTCCGAATCGTCCGCACACATGGGCAGACACCTCGTCAGACTGAACGAAA
TGACAACTCTCGACTTTCAGTTGCTGCAGCGAGTGGTGGTATGAAAGATC
CTTTGATATCAAATAGGATGAAAGATGAGGTTGATAATGATGATAGACCG
GGATCAAAACGCCGGAAAAAGGACAATTTTAATGCTAATGCATCTCCGGT
GGAAAAACTGACCGGTGAACATCGTGTTGTTCAGACTTTGAGTGAGGTTG
ATTTTGTGAATGATGGGTACCGCTGGCGTAAATATGGGCAGAAATTAGTG
AAAGGCAATCCCAATCCGAGGAATTACTATAGGTGCTCTAATTCTGGATG
CCCAGCCAAGAAACATGTTGAAAGGGCATCTCATGACCCAAAATTGGTTA
TTACAACTTATGAGGGACGACATGACCATGATATGCCACCATCACGAACT
GTTACTCCGAATGTAGCAGGCACAAAAAATTCTAAAACAGCTCATAATGG
TGAGTCTGCAAAATTAGAAGAAATTGATGCTGTCTGCTCTGATACCGATG
TCCATCGCAGTTCAGATACCCTGAGTAAGTCAACTGAGGGGAAAAATGGT
GAGCCAAAAACTAAATCTGAAGCAACCGCAACTGCTAGTGTTGGCCTGGT
CAAGTCTGAGCTATCTGCCGTACATCCTGAAAGCAAGTCAAGTGAGCCAC
AAAATGGCATTTCGAGGACCATTTGAGGAAGTGATGTTGCCCATGGTCGC
TCGTGTCACAAGGGTAGTTCAAATGACAATCAATTTGCGAGTCAGAGACT
AAATCAAAACAAATGGTACTGC
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