EY753308

Overview
NameEY753308
Unique NameEY753308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753308 vs. ExPASy Swiss-Prot
Match: ODPA_SCHPO (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=pda1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 2 
Query:  494 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALS*GVPARAGMSELFGRALVAARAR-WILHMFSKTTSAWGFAFIGEEIQLLRG 856
            +TK E L LYE M+  R  E  C  +Y   K+ GF HL  GQEAV+ G    +  +DS++++YR H  A + G+  R+ + EL GR   A++ +   +H+F+K     G   +G +I L  G
Sbjct:   73 VTKGELLGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAKNFYG-GNGIVGAQIPLGAG 193
The following BLAST results are available for this feature:
BLAST of EY753308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ODPA_SCHPO3.146e-1136.07Pyruvate dehydrogenase E1 component subunit alpha,... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753308 ID=EY753308; Name=EY753308; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGGTTGTTGAGAGTTGGGTGGCTTCCCCTGTCTTTTCAGCC
ATAATAATATCGATCGAAAATCAAACCAAACAAGTAGGCGATTACTCCCA
AATATCAAGGCCCCTCCTCTCTCCCCGTTCCTCGTTCCCTCCGCCTCGTT
CTTTCCCTCTTATATTTTATTTATACTCTCGTCTCCCTCTCCCATTTACC
TCTCACTTTCTCGGCTCCCAAACACTCTCCTTGCGGATTTCAAAATGGCC
ACGGCTTACTCTTCCGCAAAGTTCGTTCAACCATTGTCTCTGAATTCGAC
AATCAATGGCAGATCTCGTGATAATTCCTTGTTTGATCCTCTCAAAACCG
GTACTTCTTTCCTTGGATCCACTCGCAAACTCCGTGTTAATTCTGTTCAC
TCGAATCAGGGCAATGTTCGCCGTCGACTTCCCGTCGTTGCTGTCTCTGA
GGTTGTTAAGGAGAAGAAGGTCAAGTCAATTTCCAATCTGCTGATCACCA
AGCAAGAAGGCTTAGAGCTATATGAAGATATGATCCTTGGCAGATCTTTT
GAGGACATGTGCGCCCAGATGTACTACAGAGGTAAAATGTTCGGTTTTGT
TCACCTCTACAATGGTCAAGAAGCTGTGTCAACTGGATTTATTAAGCTCT
TGAAGAAAGAAGATTCTGTGGTGAGCACATACCGTGATCACGTGCATGCC
CTGAGTTAAGGGGTCCCTGCTCGTGCTGGGATGAGTGAGCTCTTTGGAAG
GGCACTGGTTGCTGCCAGGGCCAGGTGGATCTTGCACATGTTCTCAAAGA
CCACATCCGCTTGGGGGTTTGCTTTTATTGGGGAGGAAATTCAGTTGCTC
CGGGGGCGCATTCAC
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