GE213160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_MOUSE (40S ribosomal protein S13 OS=Mus musculus GN=Rps13 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.170e-25 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++YHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WKYES+TAS LVA Sbjct: 87 DLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_HUMAN (40S ribosomal protein S13 OS=Homo sapiens GN=RPS13 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.170e-25 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++YHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WKYES+TAS LVA Sbjct: 87 DLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_CRIGR (40S ribosomal protein S13 OS=Cricetulus griseus GN=RPS13 PE=3 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 4.170e-25 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++YHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WKYES+TAS LVA Sbjct: 87 DLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_CHICK (40S ribosomal protein S13 OS=Gallus gallus GN=RPS13 PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 4.170e-25 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++YHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WKYES+TAS LVA Sbjct: 87 DLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_BOVIN (40S ribosomal protein S13 OS=Bos taurus GN=RPS13 PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 4.170e-25 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++YHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP WKYES+TAS LVA Sbjct: 87 DLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_MUSDO (40S ribosomal protein S13 (Fragment) OS=Musca domestica GN=RpS13 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.113e-25 Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 + ++YH+IKKAVAIRKHLERNRKDKD KFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 47 IPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 114
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_DROME (40S ribosomal protein S13 OS=Drosophila melanogaster GN=RpS13 PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 7.113e-25 Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 + ++YH+IKKAVAIRKHLERNRKDKD KFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 84 IPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_SPOFR (40S ribosomal protein S13 OS=Spodoptera frugiperda GN=RpS13 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.070e-24 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++Y+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 87 DLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_CHOPR (40S ribosomal protein S13 OS=Choristoneura parallela GN=RpS13 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.070e-24 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++Y+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 87 DLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_ICTPU (40S ribosomal protein S13 OS=Ictalurus punctatus GN=rps13 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.703e-24 Identity = 53/65 (81.54%), Postives = 59/65 (90.77%), Query Frame = 1 Query: 19 EVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 ++YHLIKKAVA+RKHLERNRKDKD+KFRLILVESRIHRLARYYK + L P WKYES+TAS LVA Sbjct: 87 DLYHLIKKAVAVRKHLERNRKDKDAKFRLILVESRIHRLARYYKTKRVLAPNWKYESSTASALVA 151 The following BLAST results are available for this feature:
BLAST of GE213160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213160 ID=GE213160; Name=GE213160; organism=Citrus sinensis; type=EST; length=256bpback to top |