GE213160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_ANOGA (40S ribosomal protein S13 OS=Anopheles gambiae GN=RpS13 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.695e-23 Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 + ++Y LIKKAV+IRKHLERNRKD DSKFRLIL+ESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 84 IPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIHRLARYYKIKAVLPPNWKYESSTASALVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS13_DICDI (40S ribosomal protein S13 OS=Dictyostelium discoideum GN=rps13 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.422e-18 Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 + ++YHLIKKAV I KHL+R RKD D KF L LVESRIHRL R Y++ L P WKYES ASTLVA Sbjct: 84 IPEDLYHLIKKAVTINKHLQRARKDYDGKFHLRLVESRIHRLTRPYRKNGTLAPNWKYESNNASTLVA 151
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_METVS (30S ribosomal protein S15P/S13e OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps15p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.100e-12 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 4 SVVAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLV 210 S V ++++L+KKA+ +R HLE N +D SK L L+ES+I RL +YYK TK LP W+Y TA LV Sbjct: 82 SEVPEDLFNLMKKAINLRNHLENNPRDIHSKVGLNLIESKIRRLVKYYKGTKVLPATWRYSPQTARLLV 150
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_META3 (30S ribosomal protein S15P/S13e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps15p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.009e-11 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLV 210 + ++++L+KKA+ +R HLE N KD SK L L ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 84 IPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLV 150
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_IGNH4 (30S ribosomal protein S15P/S13e OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps15p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.009e-11 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLV 210 + +++HL+K+AV +R HL + KDK S L+ +ES+I RL +YYK KLPP WKY+ A LV Sbjct: 82 IPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLV 148
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_HYPBU (30S ribosomal protein S15P/S13e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps15p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.624e-11 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 7 VVAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLVA 213 VV +++ LI+KAV +R+HLE + KD +K L+ +ES+I RLA YYK KLP WKY+ A LVA Sbjct: 82 VVPEDLFRLIEKAVNLRRHLEEHPKDTHAKKGLLDLESKIRRLAEYYKRVGKLPRDWKYDPQQAKLLVA 150
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_THEPD (30S ribosomal protein S15P/S13e OS=Thermofilum pendens (strain Hrk 5) GN=rps15p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.476e-11 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYE 186 + ++ +L+K+A+ +RKHLE + KD SK L L+ES+IHRL +YYK LPP WKYE Sbjct: 82 IPEDLMNLMKRAIRVRKHLEEHPKDYHSKRGLQLIESKIHRLVKYYKREGILPPDWKYE 140
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_PYRKO (30S ribosomal protein S15P/S13e OS=Pyrococcus kodakaraensis GN=rps15p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.476e-11 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLV 210 + ++ LI++AV +RKHLE++ KDK S+ L L+ES+I RL +YY+ T KLP W+Y+ A LV Sbjct: 84 IPEDLMFLIRRAVNLRKHLEQHPKDKHSRRGLQLIESKIRRLVKYYRRTGKLPAKWRYDPEQAKLLV 150
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_METMP (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis GN=rps15p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.846e-11 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLV 210 V ++++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 84 VPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPETARLLV 150
BLAST of GE213160 vs. ExPASy Swiss-Prot
Match: RS15_METM7 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps15p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.846e-11 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 10 VAAEVYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKETKKLPPVWKYESTTASTLV 210 V ++++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 84 VPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPDTARLLV 150 The following BLAST results are available for this feature:
BLAST of GE213160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213160 ID=GE213160; Name=GE213160; organism=Citrus sinensis; type=EST; length=256bpback to top |