FK826754

Overview
NameFK826754
Unique NameFK826754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length254
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1158 contig Csv1_Contig1158:350..603. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = -2
Query:    8 IELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG 247
            ++LS  + VL+ GQ  +EG KAYR++ G+ LLFRP  NA R++   ER+ MP  S + F+ A  ++  AN++W+ P   G
Sbjct:   43 LQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSG 122          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = -2
Query:    8 IELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG 247
            ++LS  + VL+ GQ  +EG KAYR++ G+ LLFRP  NA R++   ER+ MP  S + F+ A  ++  AN++W+ P   G
Sbjct:   43 LQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSG 122          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = -2
Query:    8 ANIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG 253
            + + +   +  L+ GQ  +EG KAYR +DG I LFRP  NA RM+  A+R+ MP    + FV A K++  AN+ W+ P G G
Sbjct:   38 STLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSG 119          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 69.707 bits (169), Expect = 5.111e-12
Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = -2
Query:   23 IELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVP 247
            + + P+A V + GQ V+EG KAY +ED  +LLFRP+ N  R+    +R+C+P    +Q ++ +KQ+   +K W+P
Sbjct:   55 LSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSNDRLCIPQIDEEQVLEGLKQLVAIDKDWIP 129          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT_DICDI (Branched-chain-amino-acid aminotransferase OS=Dictyostelium discoideum GN=bcaA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.676e-12
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = -2
Query:    8 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG 250
            N+ + PSA+VL+     +EG KAY+  +G+I LFRPD N +R    A+R+C+P  + +  ++ +K++ + +K W+ P GKG
Sbjct:   70 NLSIPPSASVLHYALECFEGMKAYKDSNGKIRLFRPDQNMNRFLNSAKRICLPEFNKEAVIELIKKLCVLDKDWI-PEGKG 149          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11
Identity = 30/80 (37.50%), Postives = 47/80 (58.75%), Query Frame = -2
Query:   14 ANIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPG 253
            A + L P+  VL+  Q ++EG KAYR  DG +  FRP+ N +R +  + R+ MP   VD F++A   +   +++WVP  G
Sbjct:   57 APLSLDPATMVLHYAQEIFEGLKAYRRPDGSVATFRPEKNGARFQASSRRLGMPELPVDTFIEACDALVAQDEKWVPAHG 136          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT_NEMVE (Branched-chain-amino-acid aminotransferase OS=Nematostella vectensis GN=v1g246094 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = -2
Query:   23 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVP 250
            N+ L P+A+ L+ G   +EG KAYR +DG+I +FRP +N  RM   A R C+P+ +  + V+ ++++    + WVP
Sbjct:   96 NLSLPPAASALHYGLECFEGMKAYRGDDGKIRMFRPLMNMKRMNNSAARACLPTFNSGEMVECIRKLIHLEREWVP 171          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCA2_YEAST (Branched-chain-amino-acid aminotransferase, cytosolic OS=Saccharomyces cerevisiae GN=BAT2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = -2
Query:    8 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG 250
            N+ L PSA V +    ++EG KAYRT D +I +FRPD+N  RM   A+R+C+P+   ++ +  + ++   +K  V P GKG
Sbjct:   59 NLSLDPSAVVFHYAFELFEGMKAYRTVDNKITMFRPDMNMKRMNKSAQRICLPTFDPEELITLIGKLIQQDKCLV-PEGKG 138          
The following BLAST results are available for this feature:
BLAST of FK826754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ILVE_HELPY2.294e-1241.25Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPJ2.294e-1241.25Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HAEIN2.294e-1241.46Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE2_BACSU5.111e-1238.67Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
BCAT_DICDI6.676e-1238.27Branched-chain-amino-acid aminotransferase OS=Dict... [more]
ILVE_STRCO1.487e-1137.50Probable branched-chain-amino-acid aminotransferas... [more]
BCAT_NEMVE2.537e-1138.16Branched-chain-amino-acid aminotransferase OS=Nema... [more]
BCA2_YEAST5.651e-1139.51Branched-chain-amino-acid aminotransferase, cytoso... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionclone613 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 613, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826754 ID=FK826754; Name=FK826754; organism=Citrus sinensis; type=EST; length=254bp
ACAGTGTGCCTTTTCCTGGAGGAGGAACCCAACGCTTGTTAGCAAGAGCT
ATTTGTTTCACAGCGTCGACAAACTGATCAACGGAGGGTGACGGCATGCA
CATCCTCTCGGCACCTATCTTCATACGGGAAGCATTTAGATCTGGCCGGA
AGAGAAGAATACGCCCATCTTCTGTCCTGTATGCTTTTGTTCCTTCGTAC
ACTCCCTGTCCACAATTTAAGACTGCTGCTGAAGGGCTTAGCTCAATGTT
TGCG
back to top