FK826729

Overview
NameFK826729
Unique NameFK826729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6856 contig Csv1_Contig6856:1..288. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.280e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTVDE+R+AQ+A+GPAT +AIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.280e-31
Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVR+AQRA+GPAT MAIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+++R+AQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNSEH  +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.888e-31
Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+E RKAQRA+GPAT MAIGTATP NCVDQSTYPDYYFRITNSEH TDLKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATVMAIGTATPTNCVDQSTYPDYYFRITNSEHKTDLKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.078e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRAQGPAT MAIGT+TP NCVDQSTYPDYYFRITNSEH+ +LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.078e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRAQGPAT MAIGT+TP NCVDQSTYPDYYFRITNSEH+ +LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.663e-31
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V E+R+AQRA+GPAT +AIGTATP NCVDQSTYPDYYFRITNSEHMTDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 8.663e-31
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+E+R+AQRA+GPAT MAIGTATP NCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRA+GPAT +AIGTATP NCVDQSTYPDYYFRITNS+HMTDLK+KF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVDQSTYPDYYFRITNSDHMTDLKQKFQRMCDKSMITKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.478e-30
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+++R+AQRA+GPAT MAIGTATP NCVDQSTYPDYYFRITNSEH TDLKEKFKRMC+KSMI+KRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYM 70
The following BLAST results are available for this feature:
BLAST of FK826729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_PEA2.280e-3187.14Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS2_SOLLC2.280e-3190.00Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS1_CAMSI2.977e-3187.14Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSA_PETHY3.888e-3190.00Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHSE_IPOPU5.078e-3188.57Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI5.078e-3188.57Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSY_PHAVU8.663e-3187.14Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSJ_PETHY8.663e-3187.14Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSD_IPONI1.131e-3087.14Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHSY_PERFR1.478e-3085.71Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]

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Properties
Property NameValue
Genbank descriptionclone507 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 507, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826729 ID=FK826729; Name=FK826729; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCCG
GGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCCAAGGTCCGGCCACGAACATGGCCATTGGAACG
GCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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