FK826729

Overview
NameFK826729
Unique NameFK826729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.810e-20
Identity = 43/61 (70.49%), Postives = 55/61 (90.16%), Query Frame = 1
Query:  106 AQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            AQRA+GPA  +AIGTATP + VDQ++YPDYYFR+TNS+H+ DLKEKF+R+C K+MIKKR+M
Sbjct:   13 AQRAEGPAKILAIGTATPFHWVDQNSYPDYYFRVTNSQHLVDLKEKFRRICSKTMIKKRHM 73          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.033e-20
Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 1
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M ++ E+RKAQ ++GPA  +AIGTATP N   Q+ YPDYYFR+T SEHMT+LK+KF+ +C+KSMI+KR+M
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHM 70          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.173e-19
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 1
Query:  100 RKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            R AQRA GPAT +AIGTA P N  +QS+YPD+YF ITNS+HMT+LK KF RMC KS IKKRYM
Sbjct:   14 RLAQRANGPATVLAIGTANPANVFEQSSYPDFYFDITNSQHMTELKLKFSRMCQKSGIKKRYM 76          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: ACS3_RUTGR (Probable acridone synthase 3 OS=Ruta graveolens GN=ACS3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.614e-19
Identity = 41/70 (58.57%), Postives = 57/70 (81.43%), Query Frame = 1
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            M ++ E+RKAQ ++GPA  +AIGTA P N   Q+ YPDYYF++T SEHMT+LK+KF+ +C+KSMI+KR+M
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTANPDNVYMQADYPDYYFKMTKSEHMTELKDKFRTLCEKSMIRKRHM 70          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.934e-19
Identity = 45/71 (63.38%), Postives = 52/71 (73.24%), Query Frame = 1
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPD-YYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV V+ +RK QRA+GPAT MAIGT+TPPN VDQS YPD YYF    +      +  FKRMC+KSMIKKRYM
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYM 71          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.213e-18
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   76 TMVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            T++T    R+ +R +G A  +AIGTATP N VDQ+TYPD+YFRITNS+H+ D KEKF+R+C+KS I+KR+M
Sbjct:    6 TVLTDTWSRREKRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHM 76          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.775e-18
Identity = 37/69 (53.62%), Postives = 57/69 (82.61%), Query Frame = 1
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRY 285
            M++++ ++KA RA G A+ +AIG A P N ++QS YPD+YFR+TNSEH+ DLK+KF+R+C+K+ I+KR+
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRH 69          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.930e-18
Identity = 39/63 (61.90%), Postives = 54/63 (85.71%), Query Frame = 1
Query:  100 RKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            R+A+R +G A  +A+GTATP N VDQ+TYPD+YFRITNSEH+ + KEKF+R+C+KS I+KR++
Sbjct:   12 RRAKRFEGHAKILAVGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.410e-18
Identity = 40/71 (56.34%), Postives = 58/71 (81.69%), Query Frame = 1
Query:   76 TMVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            T++T    R+A+R +G A  +AIGTATP + VDQ+TYPD+YFRITNS+H+ + KEKF+R+C+KS I+KR++
Sbjct:    6 TVLTDTWSRRAKRLEGDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 76          
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.410e-18
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query:   76 TMVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            T++T     +A+R +G A  +AIGTATP N VDQ+TYPD+YFRITNSEH+ + KEKF+R+C+KS I KR++
Sbjct:    6 TVLTDTWSHRAKRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHL 76          
The following BLAST results are available for this feature:
BLAST of FK826729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_PETHY1.810e-2070.49Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
ACS4_RUTGR4.033e-2061.43Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSY_EQUAR1.173e-1971.43Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
ACS3_RUTGR2.614e-1958.57Probable acridone synthase 3 OS=Ruta graveolens GN... [more]
CHSY_PERAE9.934e-1963.38Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]
CHSB_IPOCO2.213e-1859.15Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
BBS_PHASS3.775e-1853.62Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
CHSA_IPOPL4.930e-1861.90Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSB_IPOPU8.410e-1856.34Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSA_IPOPU8.410e-1857.75Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]

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Properties
Property NameValue
Genbank descriptionclone507 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 507, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826729 ID=FK826729; Name=FK826729; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCCG
GGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCCAAGGTCCGGCCACGAACATGGCCATTGGAACG
GCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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