FK826729

Overview
NameFK826729
Unique NameFK826729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.478e-30
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVR+AQRA+GPAT +AIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKS IK+RYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V E+R+AQRA+GPAT +AIGTA PPNCVDQSTYPDYYFRITNSEHMT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+E RKAQRA+GPAT +AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+E RKAQRA+GPAT +AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+E RKAQRA+GPAT +AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.299e-30
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRA+GPAT MAIGTA PPNCVDQ+TYPDYYFRITNSEH  +LKEKF+RMCDKS IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.615e-30
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV++V +AQRA+GPAT +AIGTATPPNCVDQSTYPDYYFRITNSEH  +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDVWRAQRARGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSD_PETHY (Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.578e-30
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVR AQRA+GPAT +AIGTATP NCVDQSTYPDYYFRIT+SEH T+LKEKFKR+CDKSMIKKRYM
Sbjct:    1 MVTVEEVRNAQRAEGPATVLAIGTATPSNCVDQSTYPDYYFRITDSEHKTELKEKFKRICDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.251e-29
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV V+E+R AQRAQGPAT +AIGT+TP NCVDQSTYPDYYFRITNSEH T+LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.251e-29
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRA+GPAT +AIGTATP NCV+QSTYPDYYFRITNSEH T+LKEKF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYM 70
The following BLAST results are available for this feature:
BLAST of FK826729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSY_ANTMA1.478e-3087.14Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHSY_PUELO1.930e-3085.71Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSB_SOLTU1.930e-3087.14Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_SOLTU1.930e-3087.14Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS1_SOLLC1.930e-3087.14Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_HYPAN4.299e-3085.71Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS3_CAMSI5.615e-3085.71Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHSD_PETHY9.578e-3085.71Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=... [more]
CHSY_CATRO1.251e-2984.29Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS6_IPOBA1.251e-2985.71Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]

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Properties
Property NameValue
Genbank descriptionclone507 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 507, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826729 ID=FK826729; Name=FK826729; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCCG
GGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCCAAGGTCCGGCCACGAACATGGCCATTGGAACG
GCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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