FK826725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.436e-14 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 46 DYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +Y + F+I P+P VS VVE YNS+LS H L+++ D+ + +DNEA+YDI R+L I+ P Y +LN+ RF G +N D+ + NL Sbjct: 162 EYPDRMLSTFSILPAPNVSETVVEPYNSLLSIHQLVDNCDLTICIDNEALYDIAVRTLKIKSPGYKDLNQLIAKVMCGVSTSLRFPGQLNGDLRKLGMNL 261
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.436e-14 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 46 DYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +Y + L F+++ P+ S VVE YN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN RF G +N D+ + NL Sbjct: 158 EYPDRMMLTFSVFAVPEGSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNL 257
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_CANAL (Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.876e-14 Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 73 FTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 F++ PSP+VS V+E YN+ LS H L+E++D +DNEA+Y+IC+ +L + +P+Y LN R+ G +N D+ + NL Sbjct: 167 FSVVPSPKVSDTVIEPYNATLSVHQLVENSDETFCIDNEALYNICQNTLKLPQPSYAELNNLVSSVMSGVTTSLRYPGQLNSDLRKLAVNL 257
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_ACHKL (Tubulin beta chain OS=Achlya klebsiana PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.200e-14 Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 46 DYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 315 +Y + +++ PSP+VS VVE YN+ LS H L+E+ D + LDNEA+YDIC R+L + PTY +LN RF G +N Sbjct: 157 EYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTNPTYGDLNHLVCAAMSGITTLLRFPGQLN 246
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.216e-13 Identity = 36/100 (36.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 46 DYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 D+ + F++ PSP+VS VVE YN+ LS H L+E+ D +DNEA+YD+C R+L + P Y +LN RF G +N + + N+ Sbjct: 158 DFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDMCFRTLKLNNPGYGDLNHLVSLVMSGVTTCLRFPGQLNAYLRKLAVNM 257
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.588e-13 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 73 FTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +++ PSP+VS VVE YN LS H L+E+ D +DNEA+Y+IC +L P Y +LN+ RF G +N D+ + NL Sbjct: 167 YSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNL 257
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.588e-13 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 73 FTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +++ PSP+VS VVE YN LS H L+E+ D +DNEA+Y+IC +L P Y +LN+ RF G +N D+ + NL Sbjct: 167 YSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNL 257
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.709e-13 Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 178 LDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +DNEAIYDICRR+L IERP YTNLNR RFDG++NVD+ EFQTNL Sbjct: 1 VDNEAIYDICRRNLGIERPGYTNLNRLIAHVVSSITASLRFDGSLNVDLNEFQTNL 56
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_BOMMO (Tubulin beta chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.344e-12 Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 46 DYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +Y + +++ PSP VS VVE YN+ LS + L+E++ + +DNEA+Y IC R+L + PTY LN RF G +N D+ + N+ Sbjct: 158 EYPDRITATYSVVPSPTVSETVVEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMAPTYGALNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNM 257
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.672e-12 Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 46 DYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 +Y + + F++ PSP+VS VVE YN+ LS H L+E+ D + + NEA+YDIC +L + PT+ + RF G +N D+ + NL Sbjct: 156 EYPDRMMMTFSVIPSPKVSDTVVEPYNTTLSVHQLVENADEVMCIGNEALYDICLPTLKLTTPTFGH-ETLVSAVMSGVTCCLRFPGQLNSDLRKLAVNL 254 The following BLAST results are available for this feature:
BLAST of FK826725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FK826725 ID=FK826725; Name=FK826725; organism=Citrus sinensis; type=EST; length=346bpback to top |