FK826687

Overview
NameFK826687
Unique NameFK826687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12302 contig Csv1_Contig12302:1192..1567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.066e-16
Identity = 40/105 (38.10%), Postives = 64/105 (60.95%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    L R   K+ ++  + +P G  + +P  ++H DP+ W +   EF+PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  365 LRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHWPEPE-EFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.066e-16
Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W +   EF+PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   I+QN+SF+
Sbjct:  365 LRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPE-EFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.698e-16
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFEL 319
            LRLYP    L R   K  ++  + +P    + +P   +H+DPE+W D   EFKPERF++  +K + +  +Y PF +GPR C+G  FAL+  K+A   ILQ+++F +
Sbjct:  369 LRLYPIAPRLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIWSDPE-EFKPERFSKE-NKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSV 472          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.698e-16
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    L R   K+ ++  + +P G  + +P   +H+D  LW +   EF+PERF+   +K + N  +Y PF +GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  364 LRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLWPEPE-EFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.524e-16
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    L R   K  ++  L +P G+ + +P   +H+DPE W +   EF+PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  364 LRLYPIANRLERISKKAVEINGLFIPKGITVMVPTYPLHRDPEYWPEPE-EFRPERFSKE-NKGSIDPYVYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQ 466          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVS---YFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRL+P    L R   K+ ++  + +P GV + +P  ++H DP+ W +   +F PERF    SK  K+ +    Y PF SGPR C+G  FALV  K+A   +LQN+SF+
Sbjct:  364 LRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPE-KFLPERF----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFK 466          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3A1_RAT (Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16
Identity = 40/105 (38.10%), Postives = 64/105 (60.95%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    L R   K+ ++  + +P G  + +P   +H+DP+ W +   EF+PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  365 LRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPE-EFRPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ 467          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSY 331
            LRL P +   +R    + +L N + +P GV IG+ M   H++PE+WG DA  F P+ F AE + +  K+  +Y PFA G R C+G  +A++ +K A   IL+NY    S  Y
Sbjct:  358 LRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQ--KHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLY 467          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16
Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2
Query:    2 LRLYPPLTAL-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELS 322
            LR+YP  + + +R  +KET +  + +  G  + +    +H DP++WG+DA EF+PER+  G  +    +  Y PF  GPRIC+G   A++E KM    IL+ Y+FE S
Sbjct:  384 LRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESG-DELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETS 490          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVP--TLHPELG 376
            LRLYPP+  +SR + K  T     +LPAG+ + L +  +H +P++W +   EF P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A A+ L    FEL+P     PT +P   LH + G
Sbjct:  374 LRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPE-EFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTL--LRFELAPDPSRKPTVIPEVVLHSKNG 495          
The following BLAST results are available for this feature:
BLAST of FK826687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
CP3AG_MOUSE2.066e-1638.10Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AB_MOUSE2.066e-1639.05Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP3AR_ONCMY2.698e-1638.68Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP3AC_CANFA2.698e-1638.10Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AA_MESAU3.524e-1638.10Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
CP3A7_HUMAN4.603e-1639.81Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
CP3A1_RAT4.603e-1638.10Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1... [more]
CP131_DROME4.603e-1638.39Probable cytochrome P450 313a1 OS=Drosophila melan... [more]
C13A5_CAEEL7.851e-1637.96Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
CP4AP_PIG1.025e-1538.28Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionclone287 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 287, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826687 ID=FK826687; Name=FK826687; organism=Citrus sinensis; type=EST; length=376bp
ACTCAGGCTTTATCCGCCCTTAACTGCGCTTAGTCGAGCTGTTCTTAAGG
AAACGAAACTCGGAAACTTGACACTACCCGCTGGGGTTCAAATTGGCTTG
CCGATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACGATGCAGT
TGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCGGCAAAAA
ATCAAGTTTCATATTTCCCATTCGCATCGGGTCCTAGGATATGTGTTGGA
CAAAATTTTGCTCTAGTAGAAGCAAAAATGGCCACGGCAATGATTCTTCA
AAACTACTCATTCGAGTTGTCTCCATCCTATGTCCATGCTCCAACGGCGG
TTCCAACCCTTCATCCGGAACTGGGT
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