FK826687

Overview
NameFK826687
Unique NameFK826687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4P3_DROME (Probable cytochrome P450 4p3 OS=Drosophila melanogaster GN=Cyp4p3 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 5.626e-14
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSF--ELSPSYV 334
            +RL+P + A+ R   +ET+L N L LP G QI + +  +H++PE W D   EF+PERF    S+  ++  +Y PF++G R C+GQ FA+ E K     +L+ +    E+ P  +
Sbjct:  382 MRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYW-DSPEEFRPERFLPENSQN-RHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEIDPKTI 493          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.626e-14
Identity = 36/105 (34.29%), Postives = 64/105 (60.95%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP  + L R   ++ ++  + +P G  + +P+  +H DP+ W +   +F+PERF++  +K + +   + PF +GPR C+G  FAL+  K+A   +LQN+S +
Sbjct:  362 LRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPE-KFRPERFSKE-NKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQ 464          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.626e-14
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSF 313
            LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W +   EF+PERF++  +K   +   Y PF +GPR C+G+  AL+  K+A   +LQN+SF
Sbjct:  364 LRLYPVANRIERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYWPEPD-EFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGRRMALMNLKLALIRLLQNFSF 465          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.348e-14
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSF 313
            LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W +   EF+PERF++  +K   +   Y PF +GPR C+G   AL+  K+A   +LQN+SF
Sbjct:  364 LRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPD-EFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF 465          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.348e-14
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSF 313
            LRLYP    + R   K+ ++  ++ P G  + +P   +H+D + W +   EF+PERF++  +K   +   Y PF +GPR C+G   AL+  K+A   +LQN+SF
Sbjct:  364 LRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPD-EFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF 465          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 2
Query:    5 RLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTL 361
            RLYPP+  + R + K  T +   +LPAG  I L +  +H++  +W D  V F P RF+   +   ++  ++ PF++GPR C+GQ FA+ E K+ TA+ L  + F   PS +  P  VP L
Sbjct:  375 RLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEV-FDPLRFSPE-NMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKI--PIKVPQL 490          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4AL_PIG (Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus scrofa GN=CYP4A21 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAP 343
            LRLYPP+ ++ R + K  T     +LPAG+ + L +  +H +P++W +   EF P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+  A+ L  +     PS +  P
Sbjct:  374 LRLYPPVPSVGRELSKPITFPDGRSLPAGIILSLSIYGLHHNPQVWPNPE-EFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMKVVVALTLLRFELAPDPSRIPVP 484          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4B1_RABIT (Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CYP4B1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.647e-13
Identity = 42/120 (35.00%), Postives = 69/120 (57.50%), Query Frame = 2
Query:    5 RLYPPLTALSRAVLKETK-LGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTL 361
            RLYPP+  + R + K    +   +LPAG  I L +  +H++ ++W D  V F P RF+   S + ++  ++ PF++GPR C+GQ FA+ E K+ TA+ L  + F + P  +  P  +P L
Sbjct:  370 RLYPPVPQVYRQLSKPVSFVDGRSLPAGSLISLHIYALHRNSDVWPDPEV-FDPLRFSPENS-SGRHPYAFIPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSVDP--LRLPIKLPQL 485          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.647e-13
Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 2
Query:    5 RLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-EGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTL 361
            RLYPP+  + R + K  T +   +LPAG  I + +  +H++  +W D  V F   RF+ E  SK  ++  ++ PF++GPR C+GQ FA+ E K+ TAM L  + F L PS    P  +P L
Sbjct:  375 RLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEV-FDSLRFSTENASK--RHPFAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSLDPS--RLPIKMPQL 490          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTL 361
            LR+YPP+TA+SR +       +  +LP G+ + L    +H +P +W +  V F P RFA    +++++  S+ PF+ G R C+G+ FA+ E K+A A+ L    FEL P     P  +P L
Sbjct:  378 LRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEV-FDPYRFAP---ESSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTL--LRFELLPDPTRIPIPIPRL 492          
The following BLAST results are available for this feature:
BLAST of FK826687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
CP4P3_DROME5.626e-1436.84Probable cytochrome P450 4p3 OS=Drosophila melanog... [more]
CP3AV_MESAU5.626e-1434.29Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AF_CAVPO5.626e-1435.58Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]
CP3AH_CAVPO7.348e-1435.58Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
CP3AE_CAVPO7.348e-1435.58Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
CP4B1_MOUSE2.792e-1336.67Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
CP4AL_PIG2.792e-1334.78Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus s... [more]
CP4B1_RABIT3.647e-1335.00Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CY... [more]
CP4B1_HUMAN3.647e-1338.02Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CP4AC_RAT6.221e-1335.54Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]

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Properties
Property NameValue
Genbank descriptionclone287 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 287, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826687 ID=FK826687; Name=FK826687; organism=Citrus sinensis; type=EST; length=376bp
ACTCAGGCTTTATCCGCCCTTAACTGCGCTTAGTCGAGCTGTTCTTAAGG
AAACGAAACTCGGAAACTTGACACTACCCGCTGGGGTTCAAATTGGCTTG
CCGATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACGATGCAGT
TGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCGGCAAAAA
ATCAAGTTTCATATTTCCCATTCGCATCGGGTCCTAGGATATGTGTTGGA
CAAAATTTTGCTCTAGTAGAAGCAAAAATGGCCACGGCAATGATTCTTCA
AAACTACTCATTCGAGTTGTCTCCATCCTATGTCCATGCTCCAACGGCGG
TTCCAACCCTTCATCCGGAACTGGGT
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