FK826687

Overview
NameFK826687
Unique NameFK826687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12302 contig Csv1_Contig12302:1192..1567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.032e-12
Identity = 39/117 (33.33%), Postives = 65/117 (55.56%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTA 349
            +RLYPP+ A+SR +       +  +LP G  + L +  +H +P +W +  V F P RF  G   +A++  ++ PF+ G R C+G+ FA+ E K+A A+ L  +     P+ +  PTA
Sbjct:  381 MRLYPPVPAISRDLSSPVTFPDGRSLPKGFTVTLSIYGLHHNPNVWPNPEV-FDPGRFTPG---SARHSHAFLPFSGGARNCIGKQFAMNELKVAVALTLVRFELLPDPTRIPKPTA 493          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.266e-12
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSP 325
            LRL+PP+  + R   ++ ++    +PAG    + + ++ +DPE + +   EF+PERF   + +   +  +Y PF++GPR C+GQ FA++E K   + +L++  FEL P
Sbjct:  372 LRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYF-ESPDEFRPERFDADVPQI--HPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRH--FELLP 474          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4C1_BLADI (Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.266e-12
Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQD------PELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNY 307
            LRL+P +  + R + ++TK+G+  +PAG  + L +  VH++      PE +  D   F PER A+      ++  +Y PF++GPR C+GQ FA +E K   + IL+N+
Sbjct:  374 LRLFPSVPFIGRVLKEDTKIGDYLVPAGCMMNLQIYHVHRNQDQYPNPEAFNPD--NFLPERVAK------RHPYAYVPFSAGPRNCIGQKFATLEEKTVLSSILRNF 473          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.266e-12
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTA 349
            LRLYPP+  + R +       +  +LP G+ + L +  +H +P++W +  V F P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+ATA+ L  +     P+ +  P A
Sbjct:  380 LRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEV-FDPFRFAPG---SAQHSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFELLPDPTRIPIPIA 492          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSP 325
            LR+YPP    +R   ++ ++    +PAG  + + +  +H DPE W +    F PERF    ++  +   +Y PF +GPR C+G    L+  K+    +L  + FE SP
Sbjct:  401 LRMYPPAFRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPET-FDPERFTAE-ARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKFRFEASP 506          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAV 352
            LRLY P+  +SR + K  T     +LPAG+ + + +  +H +P  W D  V F P RF+   S+   +  ++ PF++G R C+GQ+FA++E K+A A+ L    F+L+P +   P  V
Sbjct:  373 LRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQV-FNPLRFSRENSEKI-HPYAFIPFSAGLRNCIGQHFAIIECKVAVALTL--LRFKLAPDHSRPPQPV 486          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTL 361
            LRLYPP+  + R +       +  +LP G+Q+ L +  +H +P++W +  V F P RFA     + ++  S+ PF+ G R C+G+ FA+ E K+  A+ L    FEL P     P  +P L
Sbjct:  379 LRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEV-FDPSRFAPD---SPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTL--LRFELLPDPTKVPIPLPRL 493          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP52F_CANTR (Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP52A6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.173e-11
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN---------LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAP 343
            LR+YP +   SR   ++T L           + +P G  +   +   H+  E +G DA +F+PER+ E  +K  K   +Y PF  GPRIC+GQ FAL EA      ++Q +    SP  V  P
Sbjct:  385 LRMYPSVPVNSRTATRDTTLPRGGGPNGTDPIFIPKGSTVAYIVYKTHRLEEYYGKDADDFRPERWFEPSTK--KLGWAYVPFNGGPRICLGQQFALTEASYVITRLVQMFETVSSPPDVEYP 505          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C28C1_DROME (Probable cytochrome P450 28c1 OS=Drosophila melanogaster GN=Cyp28c1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.173e-11
Identity = 43/126 (34.13%), Postives = 63/126 (50.00%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGN------LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTL 361
            LR+YP     S+   KE +L        L L  G  + +P+  +H DP+L+ +  V F+PERF +G  K  K Q  +  F +GPR CVG    L  AK A A I+Q +   +SP  ++     P +
Sbjct:  359 LRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDV-FRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDPLI 483          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: THAS_BOVIN (Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.532e-11
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSP 325
            LR+YPP    +R   ++ ++    +PAG  +   +  +H DPE W +    F PERF    ++  +   +Y PF +GPR C+G    L+E K+    IL+ + FE  P
Sbjct:  401 LRMYPPAFRFTRVAAQDCEVLGQRIPAGAVLETAVGALHYDPEHWPNPE-NFNPERFTAE-AQQRRRPYTYLPFGAGPRSCLGVRLGLLELKLTLLHILRKFRFEACP 506          
The following BLAST results are available for this feature:
BLAST of FK826687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
CP4A5_RABIT4.032e-1233.33Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]
CP4D2_DROME5.266e-1233.33Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]
CP4C1_BLADI5.266e-1235.19Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP... [more]
CP4AB_HUMAN5.266e-1233.33Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
THAS_MOUSE8.983e-1231.48Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
CP4Z1_HUMAN8.983e-1235.59Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP4AA_RAT8.983e-1233.88Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP52F_CANTR1.173e-1134.15Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP5... [more]
C28C1_DROME1.173e-1134.13Probable cytochrome P450 28c1 OS=Drosophila melano... [more]
THAS_BOVIN1.532e-1132.41Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionclone287 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 287, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826687 ID=FK826687; Name=FK826687; organism=Citrus sinensis; type=EST; length=376bp
ACTCAGGCTTTATCCGCCCTTAACTGCGCTTAGTCGAGCTGTTCTTAAGG
AAACGAAACTCGGAAACTTGACACTACCCGCTGGGGTTCAAATTGGCTTG
CCGATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACGATGCAGT
TGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCGGCAAAAA
ATCAAGTTTCATATTTCCCATTCGCATCGGGTCCTAGGATATGTGTTGGA
CAAAATTTTGCTCTAGTAGAAGCAAAAATGGCCACGGCAATGATTCTTCA
AAACTACTCATTCGAGTTGTCTCCATCCTATGTCCATGCTCCAACGGCGG
TTCCAACCCTTCATCCGGAACTGGGT
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