FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.892e-27
Identity = 60/86 (69.77%), Postives = 67/86 (77.91%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT+DVSVVDL VRLEK A Y EI AAIK  SE   KGILG+T D VVSTDFVG   SSIFD+ AGI L+  FVKL++WYDNE+GYS
Sbjct:  233 PTLDVSVVDLVVRLEKPADYKEIVAAIKEASETTHKGILGFTSDSVVSTDFVGSTDSSIFDSTAGIQLNPNFVKLIAWYDNEYGYS 318          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.892e-27
Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTV L+K  +Y++I A +K  +EG L GILGYT++ VVS+DF+ D+RSS+FDAKAGI L+  FVKLVSWYDNE+GYS
Sbjct:  235 PTTDVSVVDLTVNLKKPTTYEDICATMKKAAEGPLAGILGYTDEAVVSSDFLTDSRSSVFDAKAGILLTPTFVKLVSWYDNEYGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.292e-26
Identity = 60/86 (69.77%), Postives = 68/86 (79.07%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT RL K ASY  I  A+KA ++G L GIL YTED VVSTDF G+  SSIFDAKAGIAL+  FVKLV+WYDNE+GYS
Sbjct:  340 PTPNVSVVDLTCRLAKPASYSAITEAVKAAAKGPLAGILAYTEDQVVSTDFNGNPHSSIFDAKAGIALNDNFVKLVAWYDNEYGYS 425          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.292e-26
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTVRL  + +Y++IKA +KA ++  +KGI+ YTED VVSTDF+ D+ S IFDA AGI L+ +F KLV+WYDNEWGYS
Sbjct:  236 PTPDVSVVDLTVRLASETTYEDIKATMKAAADDSMKGIMKYTEDAVVSTDFIHDDASCIFDASAGIMLNSKFCKLVAWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 118.242 bits (295), Expect = 1.292e-26
Identity = 58/86 (67.44%), Postives = 66/86 (76.74%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLT +  K  SY EI AA+K  SEG L GILGYT+++VVSTDF GD  SSIFDA AGI L+  F K+V+WYDNEWGYS
Sbjct:  239 PTPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYS 324          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 1.292e-26
Identity = 58/86 (67.44%), Postives = 66/86 (76.74%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLT +  K  SY EI AA+K  SEG L GILGYT+++VVSTDF GD  SSIFDA AGI L+  F K+V+WYDNEWGYS
Sbjct:  239 PTPDVSVVDLTFKTAKATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYS 324          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.687e-26
Identity = 64/91 (70.33%), Postives = 70/91 (76.92%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGK-----LKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTV LEK ASYD IK AIK  +EGK     LKG+LGYTED VVSTDF G   +S+FDA AGIAL+  FVKLVSWYDNE GYS
Sbjct:  234 PTPNVSVVDLTVNLEKPASYDAIKQAIKDAAEGKTFNGELKGVLGYTEDAVVSTDFNGCALTSVFDADAGIALTDSFVKLVSWYDNETGYS 324          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.687e-26
Identity = 57/86 (66.28%), Postives = 68/86 (79.07%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTV LEK  +Y++I  A+K  SEG++KG+L YT++DVVS+DFV D  S   DAKAGI LS  FVKLV+WYDNEWGYS
Sbjct:  238 PTNDVSVVDLTVTLEKATTYEDIMKALKEASEGEMKGVLAYTDEDVVSSDFVTDPASCTVDAKAGIMLSPTFVKLVAWYDNEWGYS 323          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.204e-26
Identity = 56/86 (65.12%), Postives = 67/86 (77.91%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTVRL  + SYD+IKA +KA +E  +KGIL YTE+ VVSTDF+ +  S +FDA AGI L+  F KLV+WYDNEWGYS
Sbjct:  236 PTSDVSVVDLTVRLATETSYDDIKATMKAAAEDSMKGILKYTEEAVVSTDFIHEEASCVFDAGAGIMLNSRFCKLVAWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.204e-26
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT+DVSVVDLT RL KDA+Y+EI A +K  + G +KG LGYT++ +VSTDF  +  SS FDA+AGI+L+  FVKLV+WYDNEWGYS
Sbjct:  282 PTIDVSVVDLTCRLAKDATYEEICAEVKRRANGDMKGFLGYTDEPLVSTDFETEPISSTFDAEAGISLNPRFVKLVAWYDNEWGYS 367          
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
G3P_PLESA9.892e-2769.77Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
G3P_PICAN9.892e-2766.28Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3PT_MOUSE1.292e-2669.77Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PC_CHOCR1.292e-2663.95Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P1_ANAVT1.292e-2667.44Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P1_ANASP1.292e-2667.44Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_HAEIN1.687e-2670.33Glyceraldehyde-3-phosphate dehydrogenase OS=Haemop... [more]
G3PC_CHLRE1.687e-2666.28Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GRAVE2.204e-2665.12Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PA_GUITH2.204e-2663.95Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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