FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PG_CRIFA (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Crithidia fasciculata GN=GAPDG PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.521e-22
Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKA----GIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLT R  +D S  EI AA+K  S+  +KGILG+T++++VS+DF+ D RSSI+D+KA     +   K F K+VSWYDNEWGYS
Sbjct:  252 PTPDVSVVDLTFRATRDTSIQEIDAALKKASQTYMKGILGFTDEELVSSDFINDARSSIYDSKATLQNNLPGEKRFFKVVSWYDNEWGYS 341          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PG_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Leishmania mexicana GN=GAPG PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 1.251e-21
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKA----GIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLT R  +D S  EI  AIK  ++  +KGILG+T++++VS DF+ DNRSS++D+KA     +   K F K+VSWYDNEW YS
Sbjct:  252 PTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYS 341          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 2.788e-21
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKA----GIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLT    +D S  EI AA+K  S+  +K ILGYT++++VS DF+ D+RSSI+D+KA     +   + F K+VSWYDNEWGYS
Sbjct:  251 PTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILGYTDEELVSADFISDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYS 340          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.360e-20
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = -1
Query:   28 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVS 258
            PT+DVSVVDL VR+E+ A+YDEIK A +  S+G LKGI+ YT++ VVSTDF+G   SSIFD+ AGI L+  FVKL++
Sbjct:  213 PTLDVSVVDLVVRIEQSATYDEIKEAFREASKGSLKGIIEYTDEHVVSTDFIGHTASSIFDSLAGIQLNANFVKLIA 289          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 4.026e-20
Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P  DVSVVDLTV+L    +Y+ I  A+K  +   +K I+ YTE+ VVS+DF+G   SS+FDA+AG+AL+  F KLV+WYDNE GY+
Sbjct:  234 PVADVSVVDLTVKLSSATTYEAICEAVKHAANTSMKNIMYYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLVAWYDNEIGYA 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_CHLMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia muridarum GN=gap PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.171e-19
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P  DVSVVDLTV+L    +Y+ +  A+K  +   ++ I+ YTE+ VVS+DF+G   SS+FDA+AG+AL+  F KL++WYDNE GY+
Sbjct:  235 PVADVSVVDLTVKLSSATTYEAVCEAVKHAASTSMRNIMHYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLIAWYDNEIGYA 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.609e-19
Identity = 50/78 (64.10%), Postives = 59/78 (75.64%), Query Frame = -1
Query:   28 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEG-KLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVS 258
            PT+DVSVVDL VRL K  SY+EIK A K  SE  +LKGI+ YTED VVSTDF+G + SSIFDA  GI L+  FVKL++
Sbjct:  214 PTLDVSVVDLVVRLAKPTSYEEIKTAFKEASESSELKGIVAYTEDAVVSTDFLGHHASSIFDATGGIMLNDSFVKLIA 291          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5)

HSP 1 Score: 93.9745 bits (232), Expect = 2.609e-19
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDL   LEK+ + +E+ AA+KA +EG+LKGIL Y+E+ +VS D+ G   SS  DA + + +  + VK+VSWYDNE GYS
Sbjct:  235 PTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 3.408e-19
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VS+VDL V L+K+ + +E+ AA KA +EG+LKGILGY+E+ +VS D+ G   SS  DA + + +    VK++SWYDNE GYS
Sbjct:  234 PTANVSLVDLVVELDKEVTVEEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 7.592e-19
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT D S+ DLTV +EK+ + +E+ A +K  +EG+LKGI+GY ++ +VS+D +G   S IFDA     +  + VK+ SWYDNE+GYS
Sbjct:  235 PTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYS 320          
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
G3PG_CRIFA2.521e-2256.67Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3PG_LEIME1.251e-2154.44Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3PG_TRYBB2.788e-2154.44Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P_AMAMU2.360e-2061.04Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_CHLTR4.026e-2053.49Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_CHLMU1.171e-1950.00Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_BOLED2.609e-1964.10Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_BACST2.609e-1952.33Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P1_BACCE3.408e-1951.16Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]
G3P_THEMA7.592e-1947.67Glyceraldehyde-3-phosphate dehydrogenase OS=Thermo... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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