FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_STRP3 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M3 GN=gap PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDA---KAGIALSKEFVKLVSWYDNEWGYS 258
            P    SV +L V L+K+ S DEI AA+KA S        GYTED +VS+D VG +  S+FDA   K       + VK+VSWYDNE  Y+
Sbjct:  237 PVPTGSVTELVVTLDKNVSVDEINAAMKAASNDSF----GYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_STRP1 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=gap PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDA---KAGIALSKEFVKLVSWYDNEWGYS 258
            P    SV +L V L+K+ S DEI AA+KA S        GYTED +VS+D VG +  S+FDA   K       + VK+VSWYDNE  Y+
Sbjct:  237 PVPTGSVTELVVTLDKNVSVDEINAAMKAASNDSF----GYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_STREQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equisimilis GN=gap PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDA---KAGIALSKEFVKLVSWYDNEWGYS 258
            P    SV +L V L+K+ S DEI AA+KA S        GYTED +VS+D VG +  S+FDA   K       + VK+VSWYDNE  Y+
Sbjct:  237 PVPTGSVTELVVTLDKNVSVDEINAAMKAASNDSF----GYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VS+VDL V LE++ +  ++  A K      L G+L   E  +VS DF  +  S+I D+++ + + +  VK+++WYDNEWGYS
Sbjct:  236 PTKNVSLVDLVVDLEQNVTVTQVNDAFK---NADLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYS 318          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VS+VDL V LE++ +  ++  A K      L G+L   E  +VS DF  +  S+I D+++ + + +  VK+++WYDNEWGYS
Sbjct:  236 PTKNVSLVDLVVDLEQNVTVTQVNDAFK---NADLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYS 318          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_STRPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes GN=gap PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.989e-12
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDA---KAGIALSKEFVKLVSWYDNEWGYS 258
            P    SV +L V L+K+ S DEI +A+KA S        GYTED +VS+D VG +  S+FDA   K       + VK+VSWYDNE  Y+
Sbjct:  237 PVPTGSVTELVVTLDKNVSVDEINSAMKAASNDSF----GYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.989e-12
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEK-DASYDEI-----KAAIKAESEGK--LKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P  D S++DLTV + K  +S +E+     +AA K    GK  LK IL Y ED +VSTD VG+  S+IFDA     +    V + +WYDNEWGYS
Sbjct:  235 PVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVID-NLVHIAAWYDNEWGYS 327          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.174e-11
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P++DVS++DL++ LEK A  D I   +   S+G LKG+L     + VS+DF+ +  S I        L +  VK++ WYDNEWGYS
Sbjct:  235 PSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVIIAPDLTFTL-ENMVKIMGWYDNEWGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.533e-11
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P++DVS++DL++ LEK A  D I   +   S+G LKG+L     + VS+DF+ +  S I        L +  VK++ WYDNEWGYS
Sbjct:  235 PSLDVSMIDLSLFLEKKAPKDPINDLLIEASKGVLKGVLEIDLKERVSSDFISNPHSVIIAPDLTFTL-ENMVKIMGWYDNEWGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.615e-11
Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P  + S+ +  V L+ D +  ++ AA +  + G+L+G+LG T DDVVS+D +GD  S+  D ++   +S    K+++WYDNE+G+S
Sbjct:  239 PVPNGSITEFVVDLDDDVTESDVNAAFEDAAAGELEGVLGVTSDDVVSSDILGDPYSTQVDLQSTNVVS-GMTKILTWYDNEYGFS 323          
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
G3P_STRP34.035e-1246.07Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP14.035e-1246.07Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STREQ4.035e-1246.07Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P2_STAES6.883e-1239.53Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAEQ6.883e-1239.53Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P_STRPY8.989e-1244.94Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_AQUAE8.989e-1245.74Glyceraldehyde-3-phosphate dehydrogenase OS=Aquife... [more]
G3P_HELPJ1.174e-1141.86Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]
G3P_HELPY1.533e-1141.86Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]
G3P_HALVA2.615e-1137.21Glyceraldehyde-3-phosphate dehydrogenase OS=Haloar... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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