FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALPB (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKTVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALPA (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALNS (D-erythrose-4-phosphate dehydrogenase OS=Salmonella newport (strain SL254) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALHS (D-erythrose-4-phosphate dehydrogenase OS=Salmonella heidelberg (strain SL476) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALG2 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALEP (D-erythrose-4-phosphate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALDC (D-erythrose-4-phosphate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALCH (D-erythrose-4-phosphate dehydrogenase OS=Salmonella choleraesuis GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_SALA4 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella agona (strain SL483) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VS DF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
[Close]
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: E4PD_ENTS8 (D-erythrose-4-phosphate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=epd PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = -1 
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT++V+ +DL+V ++K     E+   ++  ++G   GI+ YTE  +VSTDF  D  S+I D           +K + W DNEWG++
Sbjct:  238 PTINVTAIDLSVTVQKPVKAYEVNLLLQKAAQGAFHGIVDYTELPLVSTDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFA 323
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
E4PD_SALPB9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALPA9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALNS9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALHS9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALG29.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALEP9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALDC9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALCH9.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALA49.938e-1133.72D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_ENTS89.938e-1134.88D-erythrose-4-phosphate dehydrogenase OS=Enterobac... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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