FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2038 contig Csv1_Contig2038:412..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.147e-33
Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVRLEK A+YDEIK A+KA ++G L GILGYTED++VSTD  GD RSSIFDAKAGI+L+K FVKLVSWYDNEWGYS
Sbjct:  235 PTSNVSVVDLTVRLEKGATYDEIKEAVKAAADGPLNGILGYTEDEIVSTDLNGDTRSSIFDAKAGISLNKNFVKLVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.147e-33
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT+DVSVVDL  R EK A+YDEIKAA+K  S+G LKGILGYTED VVSTDF+GDN SSIFDA AGI L+K FVKL++WYDNEWGYS
Sbjct:  235 PTLDVSVVDLVCRTEKSATYDEIKAAVKEASKGPLKGILGYTEDHVVSTDFIGDNHSSIFDATAGIQLNKNFVKLIAWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.416e-33
Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTV+L K  +Y++IKAAIKA SEG +KG+LGYTED VVSTDF GDN SSIFDA AGI LS +FVKLVSWYDNEWGYS
Sbjct:  236 PTPDVSVVDLTVKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDSVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.073e-33
Identity = 67/86 (77.91%), Postives = 77/86 (89.53%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDLTV+L+K+ +YDEIK  IK  SEGKLKG+LGYTED VVS+DF+GD+RSSIFDA AGI LS +FVKLVSWYDNE+GYS
Sbjct:  234 PTVDVSVVDLTVKLQKETTYDEIKKVIKQASEGKLKGVLGYTEDAVVSSDFLGDSRSSIFDASAGIQLSPKFVKLVSWYDNEYGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.238e-33
Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTV+L K  +Y++IKAAIKA SEG +KG+LGYTED VVSTDF GDN SSIFDA AGI LS +FVKLVSWYDNEWGYS
Sbjct:  236 PTPDVSVVDLTVKLAKPTNYEDIKAAIKAASEGPMKGVLGYTEDAVVSTDFCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.206e-32
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT+DVSVVDL VRLEK+ASYDEI A +K  SEG LKGILG+T++ VVSTDF G N SSIFD+KAGIA+SK FVKL++WYDNEWGYS
Sbjct:  235 PTLDVSVVDLVVRLEKEASYDEIVATVKEASEGPLKGILGFTDESVVSTDFTGANESSIFDSKAGIAISKSFVKLIAWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.576e-32
Identity = 68/86 (79.07%), Postives = 72/86 (83.72%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT  VSVVDLTVR+EK ASYDEIK  IK  + G LKGIL YTEDDVVSTD  GDN SSIFDAKAGI+L+K FVKLVSWYDNEWGYS
Sbjct:  236 PTATVSVVDLTVRIEKAASYDEIKEVIKKAANGPLKGILAYTEDDVVSTDMNGDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.510e-32
Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDLTV L+K+ +Y+EIK+ IKA SEGKLKG+LGYTED VVS+DF+GD RSSIFDA AGI L+  FVKL+SWYDNE+GYS
Sbjct:  235 PTVDVSVVDLTVNLKKETTYEEIKSVIKAASEGKLKGVLGYTEDAVVSSDFLGDERSSIFDASAGIQLTPSFVKLISWYDNEYGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 3.510e-32
Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT RLEK A+YDEIK A+K  SEG LKG+LGYTEDDVVS+D  GD  SSIFDAKAGIAL+  FVKLVSWYDNEWGYS
Sbjct:  236 PTSNVSVVDLTARLEKAATYDEIKQAVKEASEGPLKGVLGYTEDDVVSSDLNGDPHSSIFDAKAGIALNSNFVKLVSWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P3_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Saccharomyces cerevisiae GN=TDH3 PE=1 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 3.510e-32
Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDLTV+L K+ +YDEIK  +KA +EGKLKG+LGYTED VVS+DF+GD+ SSIFDA AGI LS +FVKLVSWYDNE+GYS
Sbjct:  234 PTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYS 319          
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
G3P_PHANO4.147e-3377.91Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_LENED4.147e-3376.74Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P2_SCHPO5.416e-3377.91Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P2_CANGA7.073e-3377.91Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P1_SCHPO9.238e-3377.91Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P_SCHCO1.206e-3275.58Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_SCLSC1.576e-3279.07Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_PICPA3.510e-3275.58Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_MONAN3.510e-3277.91Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P3_YEAST3.510e-3275.58Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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