FK826636

Overview
NameFK826636
Unique NameFK826636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12878 contig Csv1_Contig12878:469..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_ASPTN (DNA damage-inducible protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ddi1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.141e-28
Identity = 57/104 (54.81%), Postives = 75/104 (72.12%), Query Frame = -2
Query:   27 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVL 338
            + +EVNG    AFVDSGAQ TI+S  CA  C +++L+D RY G+A GVG + ILGR+H A IKIG++F PCSF V++  +++ L GLDMLR+HQ  IDLK   L
Sbjct:  190 IPVEVNGHRLNAFVDSGAQVTIMSPECATACNIMRLVDQRYGGIAKGVGTANILGRVHSAQIKIGSLFLPCSFTVMEGKHIDLLLGLDMLRRHQACIDLKRGAL 293          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_ASPCL (DNA damage-inducible protein 1 OS=Aspergillus clavatus GN=ddi1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.141e-28
Identity = 57/104 (54.81%), Postives = 75/104 (72.12%), Query Frame = -2
Query:   27 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVL 338
            + +EVNG    AFVDSGAQ TI+S  CA  C +++L+D RY G+A GVG + ILGR+H A IKIG++F PCSF V++  +++ L GLDMLR+HQ  IDLK   L
Sbjct:  189 IPVEVNGHKVNAFVDSGAQVTIMSPECATACNIMRLVDQRYGGIAKGVGTATILGRVHSAQIKIGSMFLPCSFTVMEGKHIDLLLGLDMLRRHQACIDLKNGAL 292          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_EMENI (DNA damage-inducible protein 1 OS=Emericella nidulans GN=ddi1 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.770e-28
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = -2
Query:   27 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVL 338
            + +EVNG    AFVDSGAQ TI+S  CA  C +++L+D RY G+A GVG + ILGR+H A IKIG++F PCSF V++  +++ L GLDMLR+HQ  IDL+   L
Sbjct:  198 IPVEVNGHKLNAFVDSGAQVTIMSPDCATACNIMRLVDSRYGGIAKGVGTANILGRVHSAQIKIGDMFLPCSFTVMEGKHIDLLLGLDMLRRHQACIDLRRGAL 301          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_ASPOR (DNA damage-inducible protein 1 OS=Aspergillus oryzae GN=ddi1 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.770e-28
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = -2
Query:   27 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVL 338
            + +EVNG    AFVDSGAQ TI+S  CA  C +++L+D RY G+A GVG + ILGR+H A IKIG++F PCSF V++  +++ L GLDMLR+HQ  IDL+   L
Sbjct:  190 IPVEVNGHKLNAFVDSGAQVTIMSPECATACNIMRLVDQRYGGIAKGVGTANILGRVHSAQIKIGSMFLPCSFTVMEGKHIDLLLGLDMLRRHQACIDLRRGAL 293          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_NEOFI (DNA damage-inducible protein 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ddi1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.496e-27
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = -2
Query:   27 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVL 338
            + +EVNG    AFVDSGAQ TI+S  CA  C +++L+D RY G+A GVG + ILGR+H A IKIG++F PCSF V++  +++ L GLDML++HQ  IDLK+  L
Sbjct:  190 IPVEVNGHKVNAFVDSGAQVTIMSPECATACNIMRLVDRRYGGIAKGVGTATILGRVHSAQIKIGSMFLPCSFTVMEGKHIDLLLGLDMLKRHQACIDLKKGAL 293          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_ASPFU (DNA damage-inducible protein 1 OS=Aspergillus fumigatus GN=ddi1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.496e-27
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = -2
Query:   27 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVL 338
            + +EVNG    AFVDSGAQ TI+S  CA  C +++L+D RY G+A GVG + ILGR+H A IKIG++F PCSF V++  +++ L GLDML++HQ  IDLK+  L
Sbjct:  190 IPVEVNGHKVNAFVDSGAQVTIMSPECATACNIMRLVDRRYGGIAKGVGTATILGRVHSAQIKIGSMFLPCSFTVMEGKHIDLLLGLDMLKRHQACIDLKKGAL 293          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_DEBHA (DNA damage-inducible protein 1 OS=Debaryomyces hansenii GN=DDI1 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.552e-27
Identity = 58/110 (52.73%), Postives = 85/110 (77.27%), Query Frame = -2
Query:   15 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIG--NVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGG 338
            ++++VNG+  +AFVDSGAQSTIIS   A++CG+ +L+D R+ G A GVG  +I G+IH  PI IG  +   PCSF+V+D+ +++ LFGLDMLR+H+C++DL+ +VL VGG
Sbjct:  211 INIKVNGVLVQAFVDSGAQSTIISPKLADKCGISRLIDRRFVGEARGVGSQKIEGKIHSVPIAIGDSDTHIPCSFIVIDT-HVDLLFGLDMLRRHKCVLDLERDVLVVGG 319          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_DICDI (Protein DDI1 homolog OS=Dictyostelium discoideum GN=ddi1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.685e-26
Identity = 48/111 (43.24%), Postives = 80/111 (72.07%), Query Frame = -2
Query:    6 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEV 338
            ++  +NG P KAFVD+GAQ +I+S+ CAERC + +++D R+ G+A GVG S+I+GR+H   +K+GN  +  S  +L + +++F+ GLDML++HQ I+DL   VL++   ++
Sbjct:  206 IECSINGHPLKAFVDTGAQQSIMSEKCAERCEISRIIDTRFHGIAKGVGTSKIIGRVHSTDLKLGNSLFSVSLSILQNQDVDFILGLDMLKRHQVILDLNRGVLQIANEKI 316          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_YEAST (DNA damage-inducible protein 1 OS=Saccharomyces cerevisiae GN=DDI1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.285e-26
Identity = 56/112 (50.00%), Postives = 81/112 (72.32%), Query Frame = -2
Query:    3 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVS 338
            +++E+N  P KAFVD+GAQ+TI+S   A++ GL +++D R+ G A GVG  +I+GRIH A +KI   + PCSF VLD+ +++ L GLDML++H   +DLKENVLR+   E S
Sbjct:  206 INIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSRMIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSFTVLDT-DIDVLIGLDMLKRHLACVDLKENVLRIAEVETS 316          
BLAST of FK826636 vs. ExPASy Swiss-Prot
Match: DDI1_YARLI (DNA damage-inducible protein 1 OS=Yarrowia lipolytica GN=DDI1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.471e-22
Identity = 46/107 (42.99%), Postives = 74/107 (69.16%), Query Frame = -2
Query:   18 VDMEVNGIPSKAFVDSGAQSTIISKSCAERCGLLKLLDDRYRGVAHGVGQSEILGRIHVAPIKIGNVFYPCSFVVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVG 338
            ++  +NG   KAFVD+GAQ TI+S+   E+ GL  +LD ++ GVA GVG  +ILGR+H  P++IG+ F+P S  V++   ++F+ GLDML++ +  ++L+ N L +G
Sbjct:  216 INCRINGHDVKAFVDTGAQMTILSEEFCEKVGLSHMLDVKFAGVARGVGSGKILGRVHSVPLQIGSSFFPASVSVIEGDQLQFILGLDMLKRFKANVNLRTNQLEIG 322          
The following BLAST results are available for this feature:
BLAST of FK826636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
DDI1_ASPTN5.141e-2854.81DNA damage-inducible protein 1 OS=Aspergillus terr... [more]
DDI1_ASPCL5.141e-2854.81DNA damage-inducible protein 1 OS=Aspergillus clav... [more]
DDI1_EMENI8.770e-2853.85DNA damage-inducible protein 1 OS=Emericella nidul... [more]
DDI1_ASPOR8.770e-2853.85DNA damage-inducible protein 1 OS=Aspergillus oryz... [more]
DDI1_NEOFI1.496e-2753.85DNA damage-inducible protein 1 OS=Neosartorya fisc... [more]
DDI1_ASPFU1.496e-2753.85DNA damage-inducible protein 1 OS=Aspergillus fumi... [more]
DDI1_DEBHA2.552e-2752.73DNA damage-inducible protein 1 OS=Debaryomyces han... [more]
DDI1_DICDI3.685e-2643.24Protein DDI1 homolog OS=Dictyostelium discoideum G... [more]
DDI1_YEAST6.285e-2650.00DNA damage-inducible protein 1 OS=Saccharomyces ce... [more]
DDI1_YARLI2.471e-2242.99DNA damage-inducible protein 1 OS=Yarrowia lipolyt... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionclone413 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 413, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826636 ID=FK826636; Name=FK826636; organism=Citrus sinensis; type=EST; length=339bp
ACTGAAACCTCTCCTCCACCAACTCTTAAGACATTCTCTTTTAGATCAAT
GATACACTGGTGCTTGCGGAGCATATCTAGTCCAAAGAGGAACTCCATGT
TGGGAGAGTCCAACACGACAAATGAACATGGGTAGAATACATTGCCAATC
TTGATTGGAGCAACGTGTATTCGACCAAGAATCTCTGATTGACCAACTCC
ATGAGCAACACCTCTATAACGATCATCTAGAAGCTTCAGCAATCCACAAC
GCTCTGCACAGCTTTTTGATATAATTGTTGACTGTGCACCACTATCTACA
AATGCCTTCGAAGGAATACCATTAACCTCCATGTCAACG
back to top