FK826629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FK826629 vs. ExPASy Swiss-Prot
Match: SIAH2_MOUSE (E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.245e-13 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 11 CPTCRQELG-DIRCLALEKVAESLELPCKYYHLGCPELFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 256 CPTCR L IR LA+EKVA ++ PCKY GC + K +HE +C +RPY+CP G+ C G + +++HL HK Sbjct: 112 CPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHK 194
BLAST of FK826629 vs. ExPASy Swiss-Prot
Match: SIAH2_HUMAN (E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.245e-13 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 11 CPTCRQELG-DIRCLALEKVAESLELPCKYYHLGCPELFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHK 256 CPTCR L IR LA+EKVA ++ PCKY GC + K +HE +C +RPY+CP G+ C G + +++HL HK Sbjct: 111 CPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHK 193
BLAST of FK826629 vs. ExPASy Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.798e-12 Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 2 Query: 5 NRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPELFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFN 286 N+CP C +G IRC A+E+V ES+ +PC+Y LGC + Y + HE +C F P +CP G C+ G L H H T +FN Sbjct: 75 NKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQG--CNYTGSYKDLYEHYDLTHSTG-STAYSFN 165
BLAST of FK826629 vs. ExPASy Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.798e-12 Identity = 47/142 (33.10%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 5 NRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPELFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHKVDMHTGCTFNHRYV-------KSNPREVENATWMLTVSVFD*RFVNLLYTFDVSVMVP 409 NRCP+C +G +RC A+EKV E+ + C GC E Y ++ HE +C F P +CP DC G L H+R +HK D+ +N R K+ + EN ++ V VF R ++ +Y VS + P Sbjct: 143 NRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPIL--DCHYTGYYKDLNNHVRAEHKDDL-ISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVF--RALHAVYV-SVSCIAP 278 The following BLAST results are available for this feature:
BLAST of FK826629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FK826629 ID=FK826629; Name=FK826629; organism=Citrus sinensis; type=EST; length=463bpback to top |