FE659326

Overview
NameFE659326
Unique NameFE659326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1150 contig Csv1_Contig1150:508..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.816e-12
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = -3
Query:   48 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPA-ARGSGSRA 224
            QK VK +P PRSYY+CT   C V+K VER+  D   VITTYEG+HNH +P   RGS + A
Sbjct:  182 QKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPTVVITTYEGQHNHPIPTNLRGSSAAA 241          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.097e-12
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = -3
Query:   72 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPA 224
            QK VK +P PRSYY+CT   C V+K VER+  D   VITTYEGKHNH +P+
Sbjct:  146 QKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIPS 196          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.045e-12
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = -3
Query:   75 QKVVKGNPNPRSYYKCT-HPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 224
            QK+ KGNP PR+YY+CT    CPVRK V+R S D+  +I+TYEG HNH +P
Sbjct:  201 QKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLP 251          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.900e-12
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = -3
Query:   75 QKVVKGNPNPRSYYKCTHP-GCPVRKHVERASHDLRAVITTYEGKHNHDVP 224
            QK+ KGNP PR+YY+CT   GCPVRK V+R + D   + TTYEG HNH +P
Sbjct:  249 QKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLP 299          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.537e-11
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = -3
Query:   75 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 224
            QK VK +P PRSYY+CT  GC V+K VER+S D   V+TTYEG+H H  P
Sbjct:  231 QKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFP 280          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.008e-11
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = -3
Query:   66 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAAR 224
            QK VK +P PRSYY+CT   C V+K VER+  D   VITTYE +HNH +P  R
Sbjct:  193 QKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHPIPTNR 245          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.008e-11
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = -3
Query:   84 QKVVKGNPNPRSYYKCTHP-GCPVRKHVERASHDLRAVITTYEGKHNH 224
            QK +KG+P+PR YYKC+   GCP RKHVERA  D   +I TYEG HNH
Sbjct:  291 QKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNH 338          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.008e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -3
Query:   84 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNH 224
            +K+VK +P+PR+YYKC+  GCPV+K VER   D   VITTYEG HNH
Sbjct:  123 KKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.008e-11
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = -3
Query:   72 QKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPA 224
            QK +KG+P+PR YYKC T  GCP RKHVERA  D   +I TYEG+H H+  A
Sbjct:  256 QKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRHNQSA 307          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.622e-11
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = -3
Query:   84 QKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNH 224
            QK +KG+P+PR YYKC T  GCP RKHVERA  D   +I TYEG+H H
Sbjct:  253 QKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRH 300          
The following BLAST results are available for this feature:
BLAST of FE659326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
WRK28_ARATH1.816e-1256.67Probable WRKY transcription factor 28 OS=Arabidops... [more]
WRK71_ARATH3.097e-1260.78Probable WRKY transcription factor 71 OS=Arabidops... [more]
WRK61_ARATH4.045e-1258.82Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK47_ARATH6.900e-1258.82Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRK48_ARATH1.537e-1160.00Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRKY8_ARATH2.008e-1156.60Probable WRKY transcription factor 8 OS=Arabidopsi... [more]
WRKY7_ARATH2.008e-1162.50Probable WRKY transcription factor 7 OS=Arabidopsi... [more]
WRK50_ARATH2.008e-1161.70Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK11_ARATH2.008e-1159.62Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK17_ARATH2.622e-1162.50Probable WRKY transcription factor 17 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionA113 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659326 ID=FE659326; Name=FE659326; organism=Citrus sinensis; type=EST; length=226bp
CTATTGCTGTTACTGTTATGGTTATTATTGCTGCTATTATCCGGCAGAGC
CCTGCTGCCGCTGCCGCGAGCTGCCGGAACATCATGGTTGTGCTTTCCCT
CATAGGTTGTGATCACTGCTCTAAGATCGTGTGATGCTCTCTCAACATGC
TTTCTCACTGGACAACCTGGATGCGTACACTTGTAATAACTCCTTGGATT
TGGATTCCCCTTTACAACTTTTTGGC
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