FE659323

Overview
NameFE659323
Unique NameFE659323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length169
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.660e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T
Sbjct:  108 SQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT 159          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.660e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T
Sbjct:  108 SQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT 159          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_AURPU (Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.660e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII + TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T
Sbjct:  107 SQADCAILIIAAGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT 158          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_AJECG (Elongation factor 1-alpha OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=TEF PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.660e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII + TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T
Sbjct:  108 SQADCAILIIAAGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTT 159          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.660e-16
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII   TG FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD T
Sbjct:  107 SQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT 158          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.474e-16
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T
Sbjct:  107 SQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT 158          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.474e-16
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   18 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 167
            SQADCA+LII +  G FEAGISKDGQTREHALLAFTLGV+Q+I  CNKMD
Sbjct:  107 SQADCAILIIATGIGEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMD 156          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A3_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-3 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.474e-16
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = -3
Query:   12 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT 167
            SQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T
Sbjct:  107 SQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTT 158          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_TETPY (Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = -3
Query:    9 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 167
            SQAD A+L+I S  G FEAGISKDGQTREHALLAFTLGVKQMI C NKMD  T
Sbjct:  108 SQADVAILMIASPQGEFEAGISKDGQTREHALLAFTLGVKQMIVCLNKMDEKT 160          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   18 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 167
            SQADCA+LII S TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD
Sbjct:  108 SQADCAILIIASGTGEFEAGISKDGQTREHALLAFTLGVRQLIVALNKMD 157          
The following BLAST results are available for this feature:
BLAST of FE659323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
EF1A_PODAN2.660e-1678.85Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A_NEUCR2.660e-1678.85Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A_AURPU2.660e-1678.85Elongation factor 1-alpha OS=Aureobasidium pullula... [more]
EF1A_AJECG2.660e-1678.85Elongation factor 1-alpha OS=Ajellomyces capsulata... [more]
EF1A2_SCHPO2.660e-1678.85Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A_PIRIN3.474e-1678.85Elongation factor 1-alpha OS=Piriformospora indica... [more]
EF1A_CRYNE3.474e-1680.00Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A3_RHIRA3.474e-1678.85Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_TETPY4.538e-1679.25Elongation factor 1-alpha OS=Tetrahymena pyriformi... [more]
EF1A_ASPOR4.538e-1682.00Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]

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Properties
Property NameValue
Genbank descriptionA85 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659323 ID=FE659323; Name=FE659323; organism=Citrus sinensis; type=EST; length=169bp
TACTTGGGGGTGGTGGCATCCATCTTGTTACAGCAGCAAATCATCTGCTT
CACACCAAGGGTGAAAGCAAGCAAAGCATGCTCACGAGTCTGACCATCCT
TGGAGATACCAGCTTCAAAACCACCGGTGGTAGAGTCAATGATAAGGACG
GCACAGTCAGCCTGTGAGG
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