FE659323

Overview
NameFE659323
Unique NameFE659323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length169
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:417..585. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A1_FELCA (Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = -3
Query:    6 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 167
            SQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P
Sbjct:  107 SQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEP 160          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = -3
Query:    6 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 167
            SQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P
Sbjct:  107 SQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEP 160          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = -3
Query:    6 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 167
            SQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P
Sbjct:  107 SQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEP 160          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = -3
Query:    6 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 167
            SQADCAVLI+ +  G FEAGISK+GQTREHALLA+TLGVKQ+I   NKMD+T P
Sbjct:  107 SQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEP 160          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = -3
Query:   15 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 167
            SQADCA+LII    G FEAGISKDGQTREHALLAFTLGVKQ+I   NKMD+
Sbjct:  107 SQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVKQLIVAINKMDS 157          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = -3
Query:    6 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 167
            SQAD A+L++ + TG FEAG+S++GQTREHALLA+T+GVKQ+I C NKMD T P
Sbjct:  110 SQADVALLVVSAATGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDLTDP 163          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_PICGU (Elongation factor 1-alpha OS=Pichia guilliermondii GN=TEF1 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.252e-15
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = -3
Query:   15 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 167
            SQADCA+LII   TG FEAGISKDGQTREHALLA+TLGV+Q+I   NKMD+
Sbjct:  107 SQADCAILIIAGGTGEFEAGISKDGQTREHALLAYTLGVRQLIVAVNKMDS 157          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.941e-15
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = -3
Query:    6 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 167
            SQAD A+L++ +  GGFE   SK+GQTREHALLAFTLGVKQMI   NKMDATTP
Sbjct:    3 SQADVALLVVPADQGGFEGAFSKEGQTREHALLAFTLGVKQMIVGINKMDATTP 56          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.841e-15
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = -3
Query:   15 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 167
            SQADCA+LII    G FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD+
Sbjct:  107 SQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDS 157          
BLAST of FE659323 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.841e-15
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = -3
Query:   15 SQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 167
            SQADCA+LII    G FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD+
Sbjct:  107 SQADCAILIIAGGVGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDS 157          
The following BLAST results are available for this feature:
BLAST of FE659323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
EF1A1_FELCA1.320e-1574.07Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1... [more]
EF1A1_CRIGR1.320e-1574.07Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN1.320e-1574.07Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A0_XENLA1.320e-1574.07Elongation factor 1-alpha, somatic form OS=Xenopus... [more]
EF1A_YARLI1.724e-1578.43Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1A1_XENLA1.724e-1566.67Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_PICGU2.252e-1576.47Elongation factor 1-alpha OS=Pichia guilliermondii... [more]
EF1A_EIMBO2.941e-1572.22Elongation factor 1-alpha (Fragment) OS=Eimeria bo... [more]
EF1A_YEAST3.841e-1576.47Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_ASHGO3.841e-1576.47Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]

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Properties
Property NameValue
Genbank descriptionA85 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659323 ID=FE659323; Name=FE659323; organism=Citrus sinensis; type=EST; length=169bp
TACTTGGGGGTGGTGGCATCCATCTTGTTACAGCAGCAAATCATCTGCTT
CACACCAAGGGTGAAAGCAAGCAAAGCATGCTCACGAGTCTGACCATCCT
TGGAGATACCAGCTTCAAAACCACCGGTGGTAGAGTCAATGATAAGGACG
GCACAGTCAGCCTGTGAGG
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