FE659271

Overview
NameFE659271
Unique NameFE659271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length334
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A9_HUMAN (Solute carrier family 12 member 9 OS=Homo sapiens GN=SLC12A9 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 1 
Query:    7 LTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFL 186
            LT +S+  IATNGA++GGG Y++I R LGPEVG SIGL F+L N    A+ +LG VE+ L
Sbjct:   85 LTVLSVCAIATNGAVQGGGAYFMISRTLGPEVGGSIGLMFYLANVCGCAVSLLGLVESVL 144
[Close]
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A9_DANRE (Solute carrier family 12 member 9 OS=Danio rerio GN=slc12a9 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 1 
Query:    7 LTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFL 186
            LT +S+  I+TNGA++GGG Y++I R+LGPE G SIGL F+L    A  +YVLG VE  +
Sbjct:   91 LTILSICAISTNGAVEGGGAYFMISRSLGPEFGGSIGLMFYLAKVCACGVYVLGLVEAIM 150
The following BLAST results are available for this feature:
BLAST of FE659271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
S12A9_HUMAN5.184e-1256.67Solute carrier family 12 member 9 OS=Homo sapiens ... [more]
S12A9_DANRE8.843e-1253.33Solute carrier family 12 member 9 OS=Danio rerio G... [more]

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Properties
Property NameValue
Genbank description422 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659271 ID=FE659271; Name=FE659271; organism=Citrus sinensis; type=EST; length=334bp
ACTTTCTTGACTTCTATATCTCTGAGTGTAATTGCAACAAATGGTGCGAT
GAAGGGTGGAGGACCATATTATCTCATTGGTCGTGCACTTGGTCCGGAGG
TTGGAGTTAGCATTGGACTCTGTTTTTTCCTTGGAAATGCTGTTGCTGGA
GCTATGTATGTGTTGGGAGCTGTTGAAACCTTTTTAAAAGCTGTGCCTGC
TGCTGGGATGTTTAGAGAGACTATCACAAAAGTAAATGGCACAGCAACGC
CAGAACCCATACAAAGTCCAAGTTTACACGACTTGCAAATTTATGGAATT
ATTGTGACTATCATCCTATGCTTTATTGTTTTCG
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