FE659263 | Citrus Genome Database

Overview


Name	FE659263
Unique Name	FE659263
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	875

Libraries


Library Name	Type
Hong Anliu sweet orange SSH library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSI (Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.568e-68
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 27.335 bits (59), Expect = 2.568e-68
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTD+QI EFKEAF L
Sbjct:    5 LTDEQIAEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 2.568e-68
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.568e-68
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149

HSP 2 Score: 28.8758 bits (63), Expect = 2.568e-68
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTDDQI EFKEAF L
Sbjct:    5 LTDDQIAEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 2.568e-68
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 4.355e-68
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ+GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 27.335 bits (59), Expect = 4.355e-68
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTD+QI EFKEAF L
Sbjct:    5 LTDEQIAEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 4.355e-68
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 5.671e-68
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPELLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 27.335 bits (59), Expect = 5.671e-68
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTD+QI EFKEAF L
Sbjct:    5 LTDEQIAEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 5.671e-68
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 5.671e-68
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 28.8758 bits (63), Expect = 5.671e-68
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTDDQI EFKEAF L
Sbjct:    5 LTDDQISEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 5.671e-68
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=3)

HSP 1 Score: 245.743 bits (626), Expect = 9.616e-68
Identity = 121/124 (97.58%), Postives = 124/124 (100.00%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 149

HSP 2 Score: 27.335 bits (59), Expect = 9.616e-68
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTD+QI EFKEAF L
Sbjct:    5 LTDEQISEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 9.616e-68
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 1.348e-66
Identity = 122/124 (98.39%), Postives = 122/124 (98.39%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVD DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD-EVDEMIREADVDGDGQINYEEFVKVMMAK 148

HSP 2 Score: 28.8758 bits (63), Expect = 1.348e-66
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LTDDQI EFKEAF L
Sbjct:    5 LTDDQISEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 1.348e-66
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM_SOLLC (Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 4.171e-65
Identity = 116/124 (93.55%), Postives = 123/124 (99.19%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMI+EVDAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:   26 GCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149

HSP 2 Score: 25.7942 bits (55), Expect = 4.171e-65
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LT++QI EFKEAF L
Sbjct:    5 LTEEQIAEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 4.171e-65
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.567e-65
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 124

[Close]

BLAST of FE659263 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 237.654 bits (605), Expect = 7.072e-65
Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = -2

Query:  437 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 808
            G ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNG+ISAA+ RHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFVK+MMAK
Sbjct:   26 GSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMAK 149

HSP 2 Score: 25.7942 bits (55), Expect = 7.072e-65
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = -3

Query:  829 LTDDQIFEFKEAFQL 873
            LT++QI EFKEAF L
Sbjct:    5 LTEEQIAEFKEAFSL 19

HSP 3 Score: 25.0238 bits (53), Expect = 7.072e-65
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = -1

Query:  810 KRPFSLFDKDGD 845
            K  FSLFDKDGD
Sbjct:   14 KEAFSLFDKDGD 25

The following BLAST results are available for this feature:

BLAST of FE659263 vs. ExPASy Swiss-Prot

BLAST of FE659263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 416


Match Name	E-value	Identity	Description
CALM2_ORYSI	2.568e-68	99.19	Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2...	[more]
CALM3_ORYSJ	2.568e-68	98.39	Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA...	[more]
CALM_WHEAT	4.355e-68	99.19	Calmodulin OS=Triticum aestivum PE=1 SV=3	[more]
CALM_MAIZE	5.671e-68	99.19	Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2	[more]
CALM_MALDO	5.671e-68	99.19	Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2	[more]
CALM1_ARATH	9.616e-68	97.58	Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=...	[more]
CALM_FAGSY	1.348e-66	98.39	Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3	[more]
CALM_SOLLC	4.171e-65	93.55	Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 S...	[more]
CALM2_SOLTU	6.567e-65	99.19	Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=...	[more]
CALM_MOUSC	7.072e-65	94.35	Calmodulin OS=Mougeotia scalaris PE=2 SV=3	[more]

Pages

Properties


Property Name	Value
Genbank description	351 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE659263 ID=FE659263; Name=FE659263; organism=Citrus sinensis; type=EST; length=875bp
ACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCAAATTCAT
TCATCATAACCAAAGAAATAAAATTATAGGCCAAGAAACCTAAGCTGATA
GCCTGATACATAAAATAGGATACATATTTCGACCAAAAGAAAAATAAACA
TCGCAAGGGCAGAAATTAATGAAACACATTAAACAGACAACAACATTCAT
AGAACAGCAGAACAACTAAAATAATAAAAACCGAAAAGTTTTTCGAGTCA
CAAGACATATTGACGAGGGAGACAACATTCTTCCTACACCATCAGGCCCA
TCGCCATTAAAAGACCATTGCTTCCTTTAGCCTGACCCTCATGACTATCA
AATTAAAAATTGTAAAAGAGAAAACTAGGAATCCCTTTATAATTTAGTCA
ACCCATTTTATAAGTATTGGTGGGTTGGGGTCATTACTTGGCCATCATAA
CCTTGACAAATTCCTCATAATTTATCTGGCCATCACCATCAACATCAGCT
TCCCTTATCATCTCATCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTT
TGTCATCACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCT
TGTCGAAAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCC
TTCATCTTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCC
ATTGCCATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAG
TGGGGTTCTGACCCAGTGACCTCATAACAGTGCCAAGCTCCTTGGTGGTA
ATGCAACCGGTCGCCATCCTTGTCAAACAAGCTGAAAGGCCTCTTTGAAC
TCAAAGATCTGATCGTCCGTGAGCT