FE659251

Overview
NameFE659251
Unique NameFE659251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length281
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 2.456e-30
Identity = 63/90 (70.00%), Postives = 71/90 (78.89%), Query Frame = -2
Query:   11 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLP 280
            TVYATA DPKKGSLGTIAP+AIG IVGANILA G F G SMNPA SFGPA+ +  +  HWVYWVGPLIGGGLAG++Y   F+  S E +P
Sbjct:  156 TVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSS-EHVP 244          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.208e-30
Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = -2
Query:   35 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 280
            TVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ + ++  +WVYWVGPLIGGGLAG+VY   FI
Sbjct:  155 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFI 236          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.190e-30
Identity = 53/80 (66.25%), Postives = 67/80 (83.75%), Query Frame = -2
Query:   35 YATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 274
            YAT +DPK+G +GTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPALV W W +HWVYW+GP +G GLAG++YE+  I
Sbjct:  165 YATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVI 244          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.190e-30
Identity = 65/93 (69.89%), Postives = 72/93 (77.42%), Query Frame = -2
Query:    2 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 280
            TVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+VS      W+YWVGPL+GG LAG++Y   FI  S+E + T E
Sbjct:  156 TVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFIG-SYEAVETRE 247          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.333e-30
Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = -2
Query:   35 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 280
            TVYATA DPKKGSLGTIAP+AIGFIVGANILA G F G SMNPA SFGPA+ + ++  +WVYWVGPL+GGGLAG+VY   FI
Sbjct:  155 TVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAGLVYGDVFI 236          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.219e-29
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = -2
Query:   35 VYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 277
            VY+T +DPK+GSLG IAP+AIG IVGANIL GG F GASMNPA +FGPALV W W +HW+YWVGP IG  LA ++YE+  I
Sbjct:  167 VYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVI 247          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.632e-29
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = -2
Query:   35 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 280
            TVY TA+DPK+G++  IAP+AIG IVGANIL GG FDGA MNPA++FGP+LV W W  HW++WVGPL+G  LA +VYE+  I
Sbjct:  158 TVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVI 239          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.348e-28
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = -2
Query:   29 TVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ 280
            TVYATA+D + G  G IAP+AIG + GANILAGG FDGA+MNPA +FGPALV W+W +HWVYW+GPLIG G+AG +YEF    Q
Sbjct:  165 TVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQ 247          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.335e-27
Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = -2
Query:   11 VYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLP 277
            VYAT +DP++ ++G + P+ +G +VGAN+LAGG F GASMNPA SFGPALV+  W +HWVYWVGPLIGG LAG+VY+  F+ Q  HE LP
Sbjct:  158 VYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLP 246          
BLAST of FE659251 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.176e-26
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = -2
Query:    2 VYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-QSHEQLPTTE 277
            VYAT +D ++ ++G + P+ +G +VGANILAGG + GASMNPA SFGPAL +  W +HW+YWVGPLIGG LAG+VYE  F+    HE LP  +
Sbjct:  157 VYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRND 248          
The following BLAST results are available for this feature:
BLAST of FE659251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
TIP21_ARATH2.456e-3070.00Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP21_ORYSJ3.208e-3076.83Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP31_ORYSJ4.190e-3066.25Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP23_ARATH4.190e-3069.89Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP23_MAIZE9.333e-3074.39Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP31_ARATH1.219e-2967.90Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIPA_PHAVU4.632e-2964.63Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP32_ORYSJ1.348e-2866.67Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP44_MAIZE4.335e-2762.22Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP43_ORYSJ8.176e-2656.99Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank description257 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659251 ID=FE659251; Name=FE659251; organism=Citrus sinensis; type=EST; length=281bp
ACTCGGTTGTTGGGAGCTGCTCGTGAGACTGGTTAATGAAGAAGAACTCG
TAGACGATGCCAGCTAGCCCACCACCGATGAGTGGCCCGACCCAGTAGAC
CCAGTGGTTGTCCCAGCTCCAGCTTACCAAAGCTGGCCCAAATGACACTG
CTGGGTTCATTGAAGCTCCATCAAACGCCCCGCCCGCCAAGATGTTGGCT
CCTACAATGAAACCAATTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTT
CTTTGGGTCCAGGGCTGTGGCATACACTGTG
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