FE659182

Overview
NameFE659182
Unique NameFE659182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13674 contig Csv1_Contig13674:1..652. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FE659182 vs. ExPASy Swiss-Prot
Match: INV5_ORYSJ (Beta-fructofuranosidase, insoluble isoenzyme 5 OS=Oryza sativa subsp. japonica GN=CIN5 PE=2 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30
Identity = 79/206 (38.35%), Postives = 110/206 (53.40%), Query Frame = -3 
Query:    6 GIGIRYDYGL--FYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFEKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAES------NVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFV 599
            G G+++   L  F   + FY   + RRV W W+ E DS+  DV KGWA +Q  PR V LD   G  LLQWPV+E+++LR      +  E+K G +  +   +++Q D+   FE+    LE  AES      +    C     ++  G +GPFGL+V+A   L EQT V+F + K   G  K + CTD +RSS   DV K  YG FV
Sbjct:  256 GTGVKHVLKLSEFDTHQDFYMVGRNRRVQWLWVNEYDSKADDVAKGWAGVQAFPRKVWLD-GDGKQLLQWPVDEIETLRTKRVGLQGTEVKAGGLHEIVGVASSQADVEVVFEIPN--LEDEAESFDPDWLDPHKLCKDKGAASAHGGVGPFGLIVMASGDLQEQTAVFFRVFK-HHGKYKVFMCTDLTRSSTKADVYKDAYGGFV 457
The following BLAST results are available for this feature:
BLAST of FE659182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
INV5_ORYSJ4.145e-3038.35Beta-fructofuranosidase, insoluble isoenzyme 5 OS=... [more]

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Properties
Property NameValue
Genbank description68 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659182 ID=FE659182; Name=FE659182; organism=Citrus sinensis; type=EST; length=652bp
ACTGGAACAAAGCTACCATATTTTGATTTATTGACATCATTTGCCTCAGA
AGATCTTGATTGATCAGTGCAGAAGTAAGTCTTGAGACTTCCATCCTTTC
CTTTCGCAATATAGAAGTAGACTGGAGTTTGCTCGGACAGGCTGTCATCT
GCAAGAACCAGAAGGCCAAAGGGGCCTAATGCTCCGCGTTCAGCAGATCC
TTCGCTGGAGCTGCAGCTAAACTCCACATTGGACTCCGCTGTTTTCTCTA
AAGCCGCCTTGTCTAGCTCAAACTCGGCCACTATGTCCAGCTGAGTAGCT
GAGCCAACATCAAGCGGCATCACTGACCCTGGCTTGAGCTCAATCTTTTC
AAATTCTTTGCTGGTCAATCGCAAACTGTCTACTTCCTCCACTGGCCATT
GGAGAAGATTACTACCAGTTTTTGTATCAAGCGCCACTGTCCTTGGAATG
CCCTGAAGAGACGCCCATCCTTTCTTCACATCCGCAATTTCACTGTCAGA
TTCTCCAATCCAACCCCACAACACTCTCCTCTTCTTGTTCTGATCATAGA
ACGTCTTGGACGCATAGAACAACCCGTAATCATACCTAATTCCAATGCCA
ACATCGATCTCGGGATTATCTGGCACCCATGTCACATTCTTCTCATGATA
AG
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