FE659164

Overview
NameFE659164
Unique NameFE659164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length202
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:445..646. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.258e-22
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRALFY++MQCLGA+CGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+
Sbjct:  123 GLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIV 186          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.562e-22
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FY++MQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+
Sbjct:  126 GLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIV 189          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.264e-22
Identity = 53/65 (81.54%), Postives = 54/65 (83.08%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+
Sbjct:  122 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-EGLYMGAGGGANAVNPGYTKGDGLGAEIV 185          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.149e-21
Identity = 51/65 (78.46%), Postives = 53/65 (81.54%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FYM MQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+
Sbjct:  122 GLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQ-RGLYMGSGGGANAVNPGYTKGDGLGAEIV 185          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.799e-20
Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GL LARKLSLTRA++Y+VMQCLGA+CGAGVVK F G+  Y    GGAN V+ GYTKGDGLGAE++
Sbjct:  128 GLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVV 191          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.879e-20
Identity = 49/65 (75.38%), Postives = 53/65 (81.54%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARKLSLTRA+FY++MQCLGAICG GVVKGF   G Y    G  NVVA GYTKGDGLGAEI+
Sbjct:  121 GLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQ-QGLYMGNGGRRNVVAPGYTKGDGLGAEIV 184          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.158e-17
Identity = 45/65 (69.23%), Postives = 48/65 (73.85%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL YM+ QCLGAICG G VK FM    Y  L GGAN VA GY+KG  LGAEII
Sbjct:  106 GLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKT-PYNTLGGGANTVADGYSKGTALGAEII 169          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.158e-17
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RA+ Y++ QCLGAICG G+VKGF  +  Y R  GGAN ++ GY+KG GLGAEII
Sbjct:  117 GLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQ-SSYYARYGGGANELSDGYSKGTGLGAEII 180          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.387e-17
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEII
Sbjct:  117 GLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEII 180          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.387e-17
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEII
Sbjct:  118 GLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEII 181          
The following BLAST results are available for this feature:
BLAST of FE659164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP12_MAIZE4.258e-2280.00Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE5.562e-2280.00Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP15_MAIZE7.264e-2281.54Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP13_ORYSJ6.149e-2178.46Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP16_MAIZE6.799e-2070.77Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE8.879e-2075.38Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP27_ARATH3.158e-1769.23Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP22_ORYSJ3.158e-1764.62Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP24_MAIZE5.387e-1766.15Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE5.387e-1766.15Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank description13 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659164 ID=FE659164; Name=FE659164; organism=Citrus sinensis; type=EST; length=202bp
CACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTC
TACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAA
GGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACG
TCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATT
GG
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