FE659164

Overview
NameFE659164
Unique NameFE659164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length202
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:445..646. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.387e-17
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL YMV QCLGA+CG G+VK F  A  + R  GGAN +A GY++G GLGAEI+
Sbjct:  120 GLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSA-YFDRYGGGANSLASGYSRGAGLGAEIV 183          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.036e-17
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RA+ YMV QCLGAICG G+VK FM    Y RL GGAN VA GY+ G  LGAEII
Sbjct:  104 GLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFM-MTPYKRLGGGANTVADGYSTGTALGAEII 167          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.036e-17
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY++G GLGAEII
Sbjct:  118 GLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSA-YFDRYGGGANSLASGYSRGTGLGAEII 181          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.189e-17
Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL Y+V QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEII
Sbjct:  113 GLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSA-FYVRYGGGANELSAGYSKGTGLAAEII 176          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.567e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RA+ Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY+KG GL AEII
Sbjct:  118 GLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSA-YFNRYGGGANTLAAGYSKGTGLAAEII 181          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.673e-16
Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RAL YM+ QC GAICG G+VK FM  G Y +  GGAN VA GY KG   GAE+I
Sbjct:  108 GLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTAFGAELI 171          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.492e-16
Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 3
Query:    3 LGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            LGLFLARK+SL RAL YM  QCLGAICG  +VKGF  +  Y R  GGAN +A GY+ G GL AEII
Sbjct:  114 LGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQ-SSLYDRYGGGANELAAGYSTGTGLAAEII 178          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.492e-16
Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 3
Query:    3 LGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            +GLFLARK+SL R + Y+V QCLGAICG G VK F  +  Y R  GGAN +A GY KG GLGAEII
Sbjct:  112 VGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQ-SSYYTRYGGGANELADGYNKGTGLGAEII 176          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.956e-16
Identity = 41/65 (63.08%), Postives = 45/65 (69.23%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFL RK+SL RAL YM+ QC GAICGAG+ KGF     Y R  GG N V+ GY KG  LGAEII
Sbjct:  115 GLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQ-KSFYNRYGGGVNTVSDGYNKGTALGAEII 178          
BLAST of FE659164 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.956e-16
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 3
Query:    6 GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEII 200
            GLFLARK+SL RA+ Y+V QCLGA+CG  +VKGF  +  Y R  GGAN +A GY+KG GL AEII
Sbjct:  112 GLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQ-SSFYDRYGGGANELAAGYSKGTGLAAEII 175          
The following BLAST results are available for this feature:
BLAST of FE659164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP22_MAIZE5.387e-1764.62Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP28_ARATH7.036e-1769.23Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP21_MAIZE7.036e-1766.15Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP25_MAIZE9.189e-1767.69Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_ORYSJ1.567e-1664.62Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA2.673e-1664.62Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP24_ORYSJ3.492e-1665.15Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP24_ARATH3.492e-1663.64Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE5.956e-1663.08Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP25_ORYSJ5.956e-1663.08Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank description13 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659164 ID=FE659164; Name=FE659164; organism=Citrus sinensis; type=EST; length=202bp
CACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTC
TACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAA
GGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACG
TCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATT
GG
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