FE659158

Overview
NameFE659158
Unique NameFE659158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659158 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.208e-24
Identity = 69/236 (29.24%), Postives = 122/236 (51.69%), Query Frame = -1
Query:   25 DTDXXXVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 732
            + D   VG G +GL+    L+ +  +++ I+E+ +S GGG W  G     + V+ PA   L E+GI  +E +  + +  +    + + +  +     K+   +  ED+I+K G+V GVV N   ++        +DP  + AK V+ + GHD     T  ++ + +G++  +PG K+L  +  E+ +++ T+E+ PG+ V GM      G  RMG  FG M ISG+  A + L+ L
Sbjct:   32 EVDVVIVGGGPSGLTAGRYLA-DAGVKVLILERHLSFGGGTWGGGMGCPYITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAIDA-GAKVLTGIVVEDVILKEGKVSGVVINSYAINK---AGLHIDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260          
BLAST of FE659158 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.359e-23
Identity = 73/258 (28.29%), Postives = 126/258 (48.84%), Query Frame = -1
Query:   19 VSREMTRRYMTDMITYADTDXXXVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 783
            + R + +  + D+  Y+D D   VGAG AGL+ A  L++    ++ + E+  S GGG    G +   +VV++ A   L +  + +    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  ++ G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L +
Sbjct:    5 IGRAIIKHGLEDLYEYSDVDVAIVGAGPAGLTAARYLAER-GFKVLVFERRFSFGGGIGPGGNMIPKIVVQEEALPILKDFKVRFKPAGDGLYTVDPAELIAKLAAGAIDA--GAKILLGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254          
BLAST of FE659158 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.359e-23
Identity = 75/256 (29.30%), Postives = 126/256 (49.22%), Query Frame = -1
Query:   25 VSREMTRRYMTDMITYADTDXXXVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 783
            + R +    + D+  Y+D D   VGAG AGL+ A  L++   +++ + E+  S GGG    G +   +VV++ A   L +  + Y   +D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  +V G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L
Sbjct:    5 IGRAIISHALKDLDEYSDVDVAIVGAGPAGLTAARYLAEK-GLKVVVYERRFSFGGGIGPGGNMLPKIVVQEEAVPILRDFKVRYKPAEDGLYTVDPAELIAKLAAGAVDA--GAKIILGVHVDDVIFRGDPPRVTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252          
BLAST of FE659158 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.255e-23
Identity = 75/256 (29.30%), Postives = 128/256 (50.00%), Query Frame = -1
Query:   25 VSREMTRRYMTDMITYADTDXXXVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQ-DSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 783
            ++R + +  + D+  Y++ D   VGAG AGL+ A  L++  + ++ + E+  S GGG    G +   +VV++ A   L +  + Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +A+ V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+   GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:    5 IARAIIKHGLEDLYEYSEVDVAVVGAGPAGLTAARYLAERGH-RVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLKDFRVRYRPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVAGLLWVWTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of FE659158 vs. ExPASy Swiss-Prot
Match: THI4_DESMR (Putative thiazole biosynthetic enzyme OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_31420 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21
Identity = 78/267 (29.21%), Postives = 138/267 (51.69%), Query Frame = -1
Query:   22 IKESIVSREMTRRYMTDMITYADTDXXXVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG----RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR--LKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQK-AAHLALKSLG 798
            + E I+++ +   Y     +  D D   VG G +G++ A  L+ +    +A+ E+ +S GGG W  G  F+ +VV++ +   L ++G+     +D+Y      A  T+   +  LA    K+FN ++ ED++++      RV G+V N + V +       +DP V+ +K +V + GH      T V++  ++       + G +++  ++AE   V+ TRE+ PG+ V GM      G+ RMGP FG M++SG+K AA +A K  G
Sbjct:    3 LDERIITQAILETYFEKFKSSLDLDVAIVGGGPSGMTAARLLAAD-GFNVALFERKLSLGGGMWGGGMTFNMIVVQEESVHLLTDVGVPVKRYKDNYFTADAVAATTTLASAACLA--GAKIFNCMSVEDVMLREENGVKRVTGIVINSSPVEI---AGLHVDPVVLGSKYLVEATGHAVEVLQTLVRKNDVRLNTPSGGIEGEQSMWADTAEINTVKNTREIFPGLYVAGMAANASYGSYRMGPIFGGMLLSGEKVAADIAAKLKG 263          
The following BLAST results are available for this feature:
BLAST of FE659158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_META36.208e-2429.24Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_PYRCJ2.359e-2328.29Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_PYRAE2.359e-2329.30Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_THENV5.255e-2329.30Putative thiazole biosynthetic enzyme OS=Thermopro... [more]
THI4_DESMR8.390e-2129.21Putative thiazole biosynthetic enzyme OS=Desulfovi... [more]

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Properties
Property NameValue
Genbank descriptionC97 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659158 ID=FE659158; Name=FE659158; organism=Citrus sinensis; type=EST; length=933bp
ACCGTCTAATGCATTCGGCTGGCCCAGTGACTTCAACGCCAAATGCGCAG
CCTTCTGCCCCGATATCATCATTGCTCCAAATGTCGGCCCCATTCTAGGA
GCACCATCAATCTCGGCAACTTCCATGCCGGTAACTATCATACCAGGCAC
AACCTCCCTGGTCAGCCTCACAATAGCATCTTCTGCAGAGTTCATGTCCA
GTGCCTTCATTCCAGGCACTTCCTCAATCATTCCGATACTCTTCAACCTC
TTTACTCCAGTGGCCCCAAAAGGCCCATCATGGCCACAAGAGCTCACAAC
CACCTTCGCTTCCATTACATTGGGATCCATGCAAGACTGTGTATCGTGAT
TCATTGACACCAACGCCCAGTTGGTCACCACACCACCAACTCTGCCGCCT
TTGACTATCAAGTCCTCGGCTGCCACTGCATTAAAGAGCTTGACGTTGGG
GCGGGCCAGGAGCTTGCTCATTATAGTGGAGGTGAACAGCGCTGCATGCT
TGATCACAACATAGCTGTCTTGCTCATCGTAGTCGATGCCAAGCTCGTCA
AGGAAGATGTGGGCTGGTTTGCGCACAACCATGGCAGAGAAGAGCTGTCC
ACTGAGCCACGCGCCACCGCCGGGGCTAACAGACTGTTCGATAATAGCAA
TCTGAATGTTGGGGTTTTTGCTGAGCTCATAAGCACAAGAGAGGCCAGCA
GAGCCAGCACCAACCACTACCACATCAGTGTCAGCATAAGTGATCATGTC
CGTCATGTACCTGCGTGTCATTTCACGAGAAACAATGGATTCTTTGATGG
GGTCAAACTTGAAAGTGTTCAAGTCATAAGGAGGAGAAGCAGAAGCAGAA
ATGGACAAGTTGTTGGGACGAGAAGATTTGATGGGTTGAAGACGTAGAAG
AGAGGTGACATGGGAGCCCCATGAAAGATGAGT
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