FE659124

Overview
NameFE659124
Unique NameFE659124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10582 contig Csv1_Contig10582:720..1311. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOS1_ORYSJ (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica GN=OSH6 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.506e-22
Identity = 62/156 (39.74%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   46 EAVMGCREIENTLQAL-TGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            EA      I+  L  L +G +    T AT SD+     +  S +   S   D++  G     E    L +   +E+ ++   G  SR+   R E L+KR+ GKLP D  S L  WW  H +WPYPTE+DK +L   TGL  KQINNWFINQRKR+W
Sbjct:  125 EAASFLSSIQTQLSNLCSGATSPPATTATHSDEM----VGSSDEDQCSGETDMLDIGQ----EQSSRLADHELKEMLLKKYSGCLSRL---RSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHW 269          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNX11_MAIZE (Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21
Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            +ELK  L + +   +  +R E L+KR+ GKLP D  S L  WW  H +WPYPTE+DK +L   TGL  KQINNWFINQRKR+W
Sbjct:    3 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAATGLDPKQINNWFINQRKRHW 85          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX3_HORVU (Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.712e-21
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 1
Query:  256 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            V QELK  L + +   +  +++E+ +K++ GKLP +    L +WW+ H KWPYP+E  K  L E TGL LKQINNWFINQRKR+W
Sbjct:  243 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHW 327          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX5_MAIZE (Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.236e-21
Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  265 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            ELK  L + +   +  +R E L+KR+ GKLP D  S L  WW  H +WPYPTE+DK +L   TGL  KQINNWFINQRKR+W
Sbjct:    1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 82          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: HLG3_MAIZE (Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.236e-21
Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 1
Query:  265 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            ELK  L + +   +  +R E L+KR+ GKLP D  +VL  WW  H +WPYPTE+DK +L   TGL  KQINNWFINQRKR+W
Sbjct:    1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 82          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSJ (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica GN=OSH15 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21
Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 1
Query:   46 EAVMGCREIENTLQALTGVSLGEGTGAT---MSDDEDDL--HMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            EA+   + +E+ L  + G + G G G+    ++D + +     +  +D S  ++          P E +    ++   ELK +L + +   +  +R+E  +K++ GKLP +    L  WW+ H KWPYP+E +K  L E TGL  KQINNWFINQRKR+W
Sbjct:  170 EAMEFLKRVESQLDTIAGGAHGGGAGSARLLLADGKSECVGSSEDDMDPSGRENE---------PPEIDPRAEDK---ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSI (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica GN=OSH15 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21
Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 1
Query:   46 EAVMGCREIENTLQALTGVSLGEGTGAT---MSDDEDDL--HMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            EA+   + +E+ L  + G + G G G+    ++D + +     +  +D S  ++          P E +    ++   ELK +L + +   +  +R+E  +K++ GKLP +    L  WW+ H KWPYP+E +K  L E TGL  KQINNWFINQRKR+W
Sbjct:  170 EAMEFLKRVESQLDTIAGGAHGGGAGSARLLLADGKSECVGSSEDDMDPSGRENE---------PPEIDPRAEDK---ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KN1_SOLLC (Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.506e-21
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            +ELK  L + +   +  +++E+ +K++ GKLP D    L TWW+ H KWPYP+E +K  L E TGL  KQINNWFINQRKR+W
Sbjct:  235 RELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 317          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.449e-20
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            +ELK  L + +   +  +++E+ +K++ GKLP +    L TWW+ H KWPYP+E +K  L E TGL  KQINNWFINQRKR+W
Sbjct:  278 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 360          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNAP2_MALDO (Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.449e-20
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            +ELK  L + +   +  +++E+ +K++ GKLP D    L +WW+ H KWPYP+E +K  L E TGL  KQINNWFINQRKR+W
Sbjct:  278 RELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 360          
The following BLAST results are available for this feature:
BLAST of FE659124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KNOS1_ORYSJ4.506e-2239.74Homeobox protein knotted-1-like 1 OS=Oryza sativa ... [more]
KNX11_MAIZE1.311e-2154.22Homeobox protein knotted-1-like 11 (Fragment) OS=Z... [more]
KNOX3_HORVU1.712e-2150.59Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3... [more]
KNOX5_MAIZE2.236e-2154.88Homeobox protein knotted-1-like 5 (Fragment) OS=Ze... [more]
HLG3_MAIZE2.236e-2154.88Homeobox protein liguleless 3 (Fragment) OS=Zea ma... [more]
KNOSC_ORYSJ6.506e-2133.75Homeobox protein knotted-1-like 12 OS=Oryza sativa... [more]
KNOSC_ORYSI6.506e-2133.75Homeobox protein knotted-1-like 12 OS=Oryza sativa... [more]
KN1_SOLLC6.506e-2150.60Homeotic protein knotted-1 OS=Solanum lycopersicum... [more]
KNAT1_ARATH1.449e-2049.40Homeobox protein knotted-1-like 1 OS=Arabidopsis t... [more]
KNAP2_MALDO1.449e-2049.40Homeobox protein knotted-1-like 2 OS=Malus domesti... [more]

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Properties
Property NameValue
Genbank descriptionC63 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659124 ID=FE659124; Name=FE659124; organism=Citrus sinensis; type=EST; length=592bp
ACTTTCAAAGAGCAGCTTCAGCAGCACGTCAGAGTCCATGCCGTTGAAGC
TGTCATGGGCTGCCGTGAAATTGAGAATACTTTGCAAGCTCTCACCGGAG
TATCATTGGGTGAAGGGACAGGCGCAACAATGTCTGACGATGAGGATGAC
CTACATATGGATTTCTCTCTTGATCAATCTGCTTCTGATAGTCATGATTT
GATGGGTTTTGGTCCATTACTTCCTACTGAAACTGAAAGGTCTCTTATGG
AAAGAGTTAGACAGGAGTTGAAGATTGAACTGAAGCAGGGTTTTAAATCA
AGAATTGAAGATGTAAGAGAGGAAATATTGAGAAAAAGAAGGGCCGGAAA
ATTGCCCGGTGACACAACTTCAGTGCTCAAGACTTGGTGGCAGCAACACT
CCAAATGGCCATACCCAACTGAAGATGACAAGGCAAAGCTAGTGGAGGAG
ACAGGCTTGCAACTAAAGCAAATCAACAACTGGTTCATCAACCAGAGGAA
GCGCAACTGGCACAGCAACTCCCAGTCTGTGACGTCTTTAAAGTCAAAGC
GCAAAAGCTCTATCTAGCTAGCTTGCTTTTGTGGCTCTGGGG
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