FE659117

Overview
NameFE659117
Unique NameFE659117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4114 contig Csv1_Contig4114:378..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.773e-22
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = -2
Query:    2 LLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 484
            L++LSEQQL+DCD           D GC GGL+  AY+ ++  GG++ E+ YPY    G C+ ++ K  VRV   +  + + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +          P+WI+KN+WG  WG+ G
Sbjct:  157 LINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGII--RYCENHGLNHAVLLVGYGVE-------NGIPFWILKNTWGADWGEQG 300          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.315e-22
Identity = 58/162 (35.80%), Postives = 86/162 (53.09%), Query Frame = -2
Query:    2 LLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 484
            L++LSEQQL+DCD           D GC GGL+  AY+ ++  GG++ E+ YPY    G C+ ++ K  V+V   +  + + E ++   L   GPL + ++A  +  Y  GV     C    LNH VLLVGY  +          P+WI+KN+WG  WG+ G
Sbjct:  157 LINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGVI--RYCANHGLNHAVLLVGYAVE-------NGVPFWILKNTWGTDWGEQG 300          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.024e-22
Identity = 59/167 (35.33%), Postives = 85/167 (50.90%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQQLVDC       +      GC+GG +  A  Y+   GG++ ESSYPY  +   C+F+S  I      +  I    E+ +       GP+++ ++A     Q+Y  GV     C    L+H VL VGYG++       G Q +W++KNSW   WG+ G
Sbjct:  146 TGRLVSLSEQQLVDCAGGSYYNQ------GCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSE-------GGQDFWLVKNSWATSWGESG 299          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.024e-22
Identity = 57/161 (35.40%), Postives = 85/161 (52.80%), Query Frame = -2
Query:    2 LSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 481
            ++LSEQQL+DCD           D GC GGL+  A++ ++  GG++ ES YPY    G C+ ++ K  V+V   +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGY  +          P+WI+KN+WG  WG+ G
Sbjct:  158 INLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM--KYCANHGLNHAVLLVGYAVE-------NGVPFWILKNTWGADWGEQG 300          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.949e-22
Identity = 66/198 (33.33%), Postives = 88/198 (44.44%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKG------------------------------FSILRLGNQPYWIIKNSWGKQWGDHG 493
            T  L+SLSEQ LVDC         G  +N GC GGLM NA+ Y+I   G++ ESSYPY  + G  C F+   I   +  + NI         +   HGP+++ ++A     Q Y  G+     C    L+HGVL+VGYG +G                                 +R     YWI+KNSWG  WG  G
Sbjct:  164 TKKLVSLSEQNLVDCS--------GPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIVKNSWGTSWGIKG 353          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.949e-22
Identity = 62/163 (38.04%), Postives = 83/163 (50.92%), Query Frame = -2
Query:    2 LSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV---HHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 481
            +S SEQQLVDC            +NGCSGGLM NAY+YL    GLE ESSYPY    G+C+++ +    +V  +  +         +LV       +A+ + + FM  Y  G+     C    +NH VL VGYG +G          YWI+KNSWG  WG+ G
Sbjct:  153 ISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQYL-KQFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMM-YRSGIYQSQTCSPLRVNHAVLAVGYGTQG-------GTDYWIVKNSWGTYWGERG 299          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 6.736e-22
Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI-AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG+L+SLSEQ+LVDCD S +         GC+GGLM  A+ ++I  GG++ E  YPY GK  +C  + +    V + ++ ++  +        V + P+++ + A     Q Y  G+     CG   L+HGV  VGYG +         + YWI++NSWGK WG+ G
Sbjct:  170 TGDLISLSEQELVDCDTSYN--------EGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGK-CGTA-LDHGVAAVGYGTE-------NGKDYWIVRNSWGKSWGESG 319          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.736e-22
Identity = 58/166 (34.94%), Postives = 89/166 (53.61%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ+LVDCD         T  +GC+GG M NA++Y+I  GG++ + +YPY   +G C+    ++ V +  F  +  +        V   P+++ + A     Q Y  G+     CG    NHGV++VGYG +         + YWI++NSWG+ WG+ G
Sbjct:   42 TGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTG-PCGTA-QNHGVVIVGYGTQ-------SGKNYWIVRNSWGQNWGNQG 188          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.736e-22
Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQT---YIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLS Q LVDC       E+   + GC GG MT A++Y+I T  ++ E+SYPY     KC +D +  A   + +  +P  DE  +   +   GP+++G++     +   Y  GV     C +  +NHGVL+VGYG        L  + YW++KNSWG  +GD G
Sbjct:  154 TGKLVSLSAQNLVDCS-----TEEKYGNKGCGGGFMTEAFQYIIDTS-IDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTEN-MNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQG 307          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.149e-21
Identity = 58/167 (34.73%), Postives = 88/167 (52.69%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKC-QFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ+LVDCD S +         GC+GGLM  A+++++  GGL  E  YPY G  GKC         V +  + ++P  +       V + P+++ ++A     Q Y  G+     CG   ++H V+ VGYG++           YWI++NSWG +WG+ G
Sbjct:  141 TGELVSLSEQELVDCDKSYN--------QGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-CGTN-MDHAVVAVGYGSE-------NGVDYWIVRNSWGTRWGEDG 290          
The following BLAST results are available for this feature:
BLAST of FE659117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATV_NPVAP1.773e-2235.80Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATV_NPVCD2.315e-2235.80Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CYSP1_HOMAM3.024e-2235.33Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATV_NPVCF3.024e-2235.40Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CYSP2_DICDI3.949e-2233.33Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATLL_FASHE3.949e-2238.04Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
ORYA_ORYSJ6.736e-2235.33Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
ERVB_TABDI6.736e-2234.94Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATS_RAT6.736e-2236.31Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CYSP4_BRANA1.149e-2134.73Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionC56 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659117 ID=FE659117; Name=FE659117; organism=Citrus sinensis; type=EST; length=497bp
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGA
ACAACCATTGTCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCAC
AATCTACAAGCTGCTGCTCGCTAAGACTGAGAAGATTCCCAGTCGCA
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