FE659103

Overview
NameFE659103
Unique NameFE659103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CAMLR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=pckA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.967e-23
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK+ KH    +LVNTGWSGG+YG G R+ +
Sbjct:  362 YFLSGYTAKVAGTERGITEPVATFSACFGEVFLPLHPTVYAKLLGEKISKHNVNVYLVNTGWSGGAYGVGKRMSI 436          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.967e-23
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +
Sbjct:  362 YFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSI 436          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJE (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni GN=pckA PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.967e-23
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +
Sbjct:  362 YFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSI 436          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.967e-23
Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +
Sbjct:  362 YFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSI 436          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_THET8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pckA PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            +F+SGYTA VAGTE G+ EP ATFSACFGA F+ +HP  YA ML EK++KH    +LVNTGW+GG YG G R  LP
Sbjct:  367 YFLSGYTARVAGTERGVTEPRATFSACFGAPFLPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGGPYGVGYRFPLP 442          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_THET2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pckA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            +F+SGYTA VAGTE G+ EP ATFSACFGA F+ +HP  YA ML EK++KH    +LVNTGW+GG YG G R  LP
Sbjct:  367 YFLSGYTARVAGTERGVTEPRATFSACFGAPFLPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGGPYGVGYRFPLP 442          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_AGRRK (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pckA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFS CFGA F+  HPT+Y  +L E + +HGA  WLVNTGW+GG+YG G R+ +
Sbjct:  370 HFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPTEYGNLLKELIARHGAGCWLVNTGWTGGAYGTGRRMPI 444          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = -2
Query:   14 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSR 229
            HFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLAEKM +H A  WL+NTGW+G SY  G +
Sbjct:  381 HFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLSLHPMRYATMLAEKMHEHSANAWLINTGWTGSSYVSGGK 452          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSY  G R+ +
Sbjct:  362 YFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSI 436          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++K+    +LVNTGWSGGSYG G R+ +
Sbjct:  362 YFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSI 436          
The following BLAST results are available for this feature:
BLAST of FE659103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_CAMLR2.967e-2364.00Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJJ2.967e-2365.33Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJE2.967e-2365.33Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ82.967e-2365.33Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_THET81.127e-2263.16Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus... [more]
PCKA_THET21.127e-2263.16Phosphoenolpyruvate carboxykinase [ATP] OS=Thermus... [more]
PCKA_AGRRK1.127e-2261.33Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_CANGA1.472e-2261.11Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_CAMJR1.472e-2264.00Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJD1.472e-2264.00Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]

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Properties
Property NameValue
Genbank descriptionC42 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659103 ID=FE659103; Name=FE659103; organism=Citrus sinensis; type=EST; length=230bp
ACGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCA
GTGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAG
CATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGC
AAGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCT
ACCAAAGCAGTGTAGCCACTGATGAAATGG
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